5NWM

Insight into the molecular recognition mechanism of the coactivator NCoA1 by STAT6


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
12D 1H-15N HSQC50 mM HEPES, 150 mM sodium chloride, 10 % D2O, 1 mM [U-99% 13C; U-99% 15N] STAT690% H2O/10% D2O150 mM7.01 atm309Bruker AVANCE III 600
22D 1H-13C HSQC aliphatic50 mM HEPES, 150 mM sodium chloride, 10 % D2O, 1 mM [U-99% 13C; U-99% 15N] STAT690% H2O/10% D2O150 mM7.01 atm309Bruker AVANCE III 600
33D CBCA(CO)NH50 mM HEPES, 150 mM sodium chloride, 10 % D2O, 1 mM [U-99% 13C; U-99% 15N] STAT690% H2O/10% D2O150 mM7.01 atm309Bruker AVANCE III 600
43D HNCA50 mM HEPES, 150 mM sodium chloride, 10 % D2O, 1 mM [U-99% 13C; U-99% 15N] STAT690% H2O/10% D2O150 mM7.01 atm309Bruker AVANCE III 600
53D 1H-15N TOCSY50 mM HEPES, 150 mM sodium chloride, 10 % D2O, 1 mM [U-99% 13C; U-99% 15N] STAT690% H2O/10% D2O150 mM7.01 atm309Bruker AVANCE III 600
63D 1H-15N NOESY50 mM HEPES, 150 mM sodium chloride, 10 % D2O, 1 mM [U-99% 13C; U-99% 15N] STAT690% H2O/10% D2O150 mM7.01 atm309Bruker AVANCE III 700
72D 1H-15N HSQC1 mM [U-99% 13C; U-99% 15N] STAT6, 0.7 mM NCoA1, 50 mM HEPES, 150 mM sodium chloride, 10 % D2O90% H2O/10% D2O150 mM7.01 atm309Bruker AVANCE III 600
82D 1H-13C HSQC aliphatic1 mM [U-99% 13C; U-99% 15N] STAT6, 0.7 mM NCoA1, 50 mM HEPES, 150 mM sodium chloride, 10 % D2O90% H2O/10% D2O150 mM7.01 atm309Bruker AVANCE III 600
92D 1H-13C HSQC aromatic1 mM [U-99% 13C; U-99% 15N] STAT6, 0.7 mM NCoA1, 50 mM HEPES, 150 mM sodium chloride, 10 % D2O90% H2O/10% D2O150 mM7.01 atm309Bruker AVANCE III 600
103D CBCA(CO)NH1 mM [U-99% 13C; U-99% 15N] STAT6, 0.7 mM NCoA1, 50 mM HEPES, 150 mM sodium chloride, 10 % D2O90% H2O/10% D2O150 mM7.01 atm309Bruker AVANCE III 600
113D HNCO1 mM [U-99% 13C; U-99% 15N] STAT6, 0.7 mM NCoA1, 50 mM HEPES, 150 mM sodium chloride, 10 % D2O90% H2O/10% D2O150 mM7.01 atm309Bruker AVANCE III 600
123D HNCA1 mM [U-99% 13C; U-99% 15N] STAT6, 0.7 mM NCoA1, 50 mM HEPES, 150 mM sodium chloride, 10 % D2O90% H2O/10% D2O150 mM7.01 atm309Bruker AVANCE III 700
133D 1H-15N NOESY1 mM [U-99% 13C; U-99% 15N] STAT6, 0.7 mM NCoA1, 50 mM HEPES, 150 mM sodium chloride, 10 % D2O90% H2O/10% D2O150 mM7.01 atm309Bruker AVANCE III 800
143D 1H-15N TOCSY1 mM [U-99% 13C; U-99% 15N] STAT6, 0.7 mM NCoA1, 50 mM HEPES, 150 mM sodium chloride, 10 % D2O90% H2O/10% D2O150 mM7.01 atm309Bruker AVANCE III 600
233D 1H-13C NOESY aliphatic1 mM [U-99% 13C; U-99% 15N] STAT6, 0.7 mM NCoA1, 50 mM HEPES, 150 mM sodium chloride, 100 % D2O100% D2O150 mM7.01 atm309Bruker AVANCE III 800
223D 1H-13C NOESY aromatic1 mM [U-99% 13C; U-99% 15N] STAT6, 0.7 mM NCoA1, 50 mM HEPES, 150 mM sodium chloride, 100 % D2O100% D2O150 mM7.01 atm309Bruker AVANCE III 800
213D HNHA1 mM [U-99% 13C; U-99% 15N] STAT6, 0.7 mM NCoA1, 50 mM HEPES, 150 mM sodium chloride, 10 % D2O90% H2O/10% D2O150 mM7.01 atm309Bruker AVANCE III 700
203D HNHA50 mM HEPES, 150 mM sodium chloride, 10 % D2O, 1 mM [U-99% 13C; U-99% 15N] STAT690% H2O/10% D2O150 mM7.01 atm309Bruker AVANCE III 700
193D HCCH-TOCSY1 mM [U-99% 13C; U-99% 15N] STAT6, 0.7 mM NCoA1, 50 mM HEPES, 150 mM sodium chloride, 100 % D2O100% D2O150 mM7.01 atm309Bruker AVANCE III 600
183D HNCACB1 mM [U-99% 13C; U-99% 15N] STAT6, 0.7 mM NCoA1, 50 mM HEPES, 150 mM sodium chloride, 10 % D2O90% H2O/10% D2O150 mM7.01 atm309Bruker AVANCE III 700
172D 1H-15N HSQC0.7 mM [U-99% 13C; U-99% 15N] NCoA1, 1 mM STAT6, 50 mM HEPES, 150 mM sodium chloride, 10 % D2O90% H2O/10% D2O150 mM7.01 atm309Bruker AVANCE III 600
282D 1H-13C HSQC aliphatic0.7 mM [U-99% 13C; U-99% 15N] NCoA1, 1 mM STAT6, 50 mM HEPES, 150 mM sodium chloride, 10 % D2O90% H2O/10% D2O150 mM7.01 atm309Bruker AVANCE III 600
272D 1H-13C HSQC aromatic0.7 mM [U-99% 13C; U-99% 15N] NCoA1, 1 mM STAT6, 50 mM HEPES, 150 mM sodium chloride, 10 % D2O90% H2O/10% D2O150 mM7.01 atm309Bruker AVANCE III 600
263D CBCA(CO)NH0.7 mM [U-99% 13C; U-99% 15N] NCoA1, 1 mM STAT6, 50 mM HEPES, 150 mM sodium chloride, 10 % D2O90% H2O/10% D2O150 mM7.01 atm309Bruker AVANCE III 600
253D HNCO0.7 mM [U-99% 13C; U-99% 15N] NCoA1, 1 mM STAT6, 50 mM HEPES, 150 mM sodium chloride, 10 % D2O90% H2O/10% D2O150 mM7.01 atm309Bruker AVANCE III 600
243D HNCA0.7 mM [U-99% 13C; U-99% 15N] NCoA1, 1 mM STAT6, 50 mM HEPES, 150 mM sodium chloride, 10 % D2O90% H2O/10% D2O150 mM7.01 atm309Bruker AVANCE III 600
163D 1H-15N NOESY0.7 mM [U-99% 13C; U-99% 15N] NCoA1, 1 mM STAT6, 50 mM HEPES, 150 mM sodium chloride, 10 % D2O90% H2O/10% D2O150 mM7.01 atm309Bruker AVANCE III 800
153D 1H-15N TOCSY0.7 mM [U-99% 13C; U-99% 15N] NCoA1, 1 mM STAT6, 50 mM HEPES, 150 mM sodium chloride, 10 % D2O90% H2O/10% D2O150 mM7.01 atm309Bruker AVANCE III 600
323D 1H-13C NOESY aliphatic0.7 mM [U-99% 13C; U-99% 15N] NCoA1, 1 mM STAT6, 50 mM HEPES, 150 mM sodium chloride, 100 % D2O100% D2O150 mM7.01 atm309Bruker AVANCE III 800
313D 1H-13C NOESY aromatic0.7 mM [U-99% 13C; U-99% 15N] NCoA1, 1 mM STAT6, 50 mM HEPES, 150 mM sodium chloride, 100 % D2O100% D2O150 mM7.01 atm309Bruker AVANCE III 800
303D HNHA0.7 mM [U-99% 13C; U-99% 15N] NCoA1, 1 mM STAT6, 50 mM HEPES, 150 mM sodium chloride, 10 % D2O90% H2O/10% D2O150 mM7.01 atm309Bruker AVANCE III 600
293D HCCH-TOCSY0.7 mM [U-99% 13C; U-99% 15N] NCoA1, 1 mM STAT6, 50 mM HEPES, 150 mM sodium chloride, 100 % D2O100% D2O150 mM7.01 atm309Bruker AVANCE III 600
352D 1H-15N HSQC1 mM [U-99% 15N] STAT6, 50 mM HEPES, 150 mM sodium chloride, 10 % D2O90% H2O/10% D2O150 mM7.01 atm309Bruker AVANCE III 900
342D 1H-15N HSQC1 mM [U-99% 15N] STAT6, 0.7 mM NCoA1, 50 mM HEPES, 150 mM sodium chloride, 10 % D2O90% H2O/10% D2O150 mM7.01 atm309Bruker AVANCE III 900
332D 1H-15N HSQC0.7 mM [U-99% 15N] NCoA1, 1 mM STAT6, 50 mM HEPES, 150 mM sodium chloride, 10 % D2O90% H2O/10% D2O150 mM7.01 atm309Bruker AVANCE III 900
363D 1H,13C-edited/12C-filter NOESY1 mM [U-99% 13C; U-99% 15N] STAT6, 0.7 mM NCoA1, 50 mM HEPES, 150 mM sodium chloride, 100 % D2O100% D2O150 mM7.01 atm309Bruker AVANCE III 700
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1BrukerAVANCE III600
2BrukerAVANCE III700
3BrukerAVANCE III600
4BrukerAVANCE III700
5BrukerAVANCE III800
6BrukerAVANCE III900
NMR Refinement
MethodDetailsSoftware
simulated annealingCYANA
NMR Ensemble Information
Conformer Selection Criteriastructures with the lowest energy
Conformers Calculated Total Number100
Conformers Submitted Total Number20
Representative Model1 (minimized average structure)
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1refinementCYANAGuntert, Mumenthaler and Wuthrich
2structure calculationCYANAGuntert, Mumenthaler and Wuthrich
3chemical shift assignmentCARAKeller and Wuthrich
4peak pickingCARAKeller and Wuthrich
5processingNMRPipeDelaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax
6collectionTopSpinBruker Biospin
7data analysisTALOSCornilescu, Delaglio and Bax
8data analysisSparkyGoddard