5NKO | pdb_00005nko

Solution structure of the C-terminal domain of S. aureus Hibernating Promoting Factor (CTD-SaHPF)

SOLUTION NMR

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NMR Experiment
Experiment	Type	Sample Contents	Solvent	Ionic Strength	pH	Pressure	Temperature (K)	Spectrometer
1	3D 1H-13C NOESY aliphatic	2.0 mM [U-99% 13C; U-99% 15N] C-terminal domain of SaHPF, 50 mM potassium phosphate, 250 mM NH4Cl	90% H2O/10% D2O	250 mM	7.6	1 bar	308	Bruker AVANCE III 700
2	3D 1H-13C NOESY aromatic	2.0 mM [U-99% 13C; U-99% 15N] C-terminal domain of SaHPF, 50 mM potassium phosphate, 250 mM NH4Cl	90% H2O/10% D2O	250 mM	7.6	1 bar	308	Bruker AVANCE III 700
3	3D 1H-15N NOESY	2.0 mM [U-99% 13C; U-99% 15N] C-terminal domain of SaHPF, 50 mM potassium phosphate, 250 mM NH4Cl	90% H2O/10% D2O	250 mM	7.6	1 bar	308	Bruker AVANCE III 700
4	2D 1H-1H NOESY	2.0 mM [U-99% 13C; U-99% 15N] C-terminal domain of SaHPF, 50 mM potassium phosphate, 250 mM NH4Cl	90% H2O/10% D2O	250 mM	7.6	1 bar	308	Bruker AVANCE III 700

NMR Spectrometer Information
Spectrometer	Manufacturer	Model	Field Strength
1	Bruker	AVANCE III	700

NMR Refinement
Method	Details	Software
simulated annealing		ARIA

NMR Ensemble Information
Conformer Selection Criteria	structures with the lowest energy
Conformers Calculated Total Number	500
Conformers Submitted Total Number	10
Representative Model	1 (lowest energy)

Computation: NMR Software
#	Classification	Version	Software Name	Author
1	chemical shift assignment	ARIA		Linge, O'Donoghue and Nilges
4	peak picking	ARIA		Linge, O'Donoghue and Nilges
5	processing	TopSpin		Bruker Biospin
2	structure calculation	CNS		Brunger, Adams, Clore, Gros, Nilges and Read
6	data analysis	PROCHECK / PROCHECK-NMR		Laskowski, MacArthur, Smith, Jones, Hutchinson, Morris, Moss and Thornton
3	refinement	CNS		Brunger, Adams, Clore, Gros, Nilges and Read