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Hen Egg-White Lysozyme (HEWL) cocrystallized in the presence of Cadmium sulphate
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 295 0.1 M Sodium acetate pH 4.8 10-12% NaCl
20-25% Ethylene Glycol
60 mg/ ml HEWL in 0.1 M Sodium acetate pH 4.8
Crystal Properties Matthews coefficient Solvent content 2 38.54
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 78.74 α = 90 b = 78.74 β = 90 c = 37.01 γ = 90
Symmetry Space Group P 43 21 2
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 80 PIXEL DECTRIS PILATUS 6M-F 2015-10-22 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON PETRA III, DESY BEAMLINE P11 1.03320 PETRA III, DESY P11
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.1 39.37 100 55 28 47744
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION SAD THROUGHOUT 1.1 55.68 46766 953 99.95 0.13013 0.12987 0.1305 0.14305 0.145 RANDOM 15.03
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.27 0.27 -0.55
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 36.223 r_sphericity_free 21.608 r_dihedral_angle_4_deg 17.43 r_dihedral_angle_3_deg 11.884 r_sphericity_bonded 7.995 r_dihedral_angle_1_deg 6.284 r_long_range_B_refined 3.794 r_long_range_B_other 3.488 r_rigid_bond_restr 2.886 r_scangle_other 1.873
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 36.223 r_sphericity_free 21.608 r_dihedral_angle_4_deg 17.43 r_dihedral_angle_3_deg 11.884 r_sphericity_bonded 7.995 r_dihedral_angle_1_deg 6.284 r_long_range_B_refined 3.794 r_long_range_B_other 3.488 r_rigid_bond_restr 2.886 r_scangle_other 1.873 r_scbond_it 1.774 r_scbond_other 1.773 r_angle_refined_deg 1.62 r_mcangle_other 1.446 r_mcangle_it 1.441 r_angle_other_deg 1.121 r_mcbond_it 1.018 r_mcbond_other 1.014 r_chiral_restr 0.132 r_bond_refined_d 0.014 r_gen_planes_refined 0.01 r_gen_planes_other 0.004 r_bond_other_d 0.002 r_nbd_refined r_nbd_other r_nbtor_refined r_nbtor_other r_xyhbond_nbd_refined r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_refined r_symmetry_vdw_other r_symmetry_hbond_refined r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_scangle_it
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 1001 Nucleic Acid Atoms Solvent Atoms 118 Heterogen Atoms 25
Software Software Software Name Purpose REFMAC refinement XDS data reduction XSCALE data scaling SHELXDE phasing