5LUE

Minor form of the recombinant cytotoxin-1 from N. oxiana


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
13D HNCA1 mM [U-99% 13C; U-99% 15N] recombinant cytotoxin-1, 95 v/v non-labeled H2O, 5 v/v 99.9%-2H D2O, 3 uM non-labeled NaOH, 1 uM non-labeled HCl95% H2O/5% D2O06.5101325 Pa303Bruker Avance 700
23D HNCACB1 mM [U-99% 13C; U-99% 15N] recombinant cytotoxin-1, 95 v/v non-labeled H2O, 5 v/v 99.9%-2H D2O, 3 uM non-labeled NaOH, 1 uM non-labeled HCl95% H2O/5% D2O06.5101325 Pa303Bruker Avance 700
33D HNCO1 mM [U-99% 13C; U-99% 15N] recombinant cytotoxin-1, 95 v/v non-labeled H2O, 5 v/v 99.9%-2H D2O, 3 uM non-labeled NaOH, 1 uM non-labeled HCl95% H2O/5% D2O06.5101325 Pa303Bruker Avance 700
43D HN(COCA)CB1 mM [U-99% 13C; U-99% 15N] recombinant cytotoxin-1, 95 v/v non-labeled H2O, 5 v/v 99.9%-2H D2O, 3 uM non-labeled NaOH, 1 uM non-labeled HCl95% H2O/5% D2O06.5101325 Pa303Bruker Avance 700
53D HCCH-TOCSY1 mM [U-99% 13C; U-99% 15N] recombinant cytotoxin-1, 95 v/v non-labeled H2O, 5 v/v 99.9%-2H D2O, 3 uM non-labeled NaOH, 1 uM non-labeled HCl95% H2O/5% D2O06.5101325 Pa303Bruker Avance 700
62D 1H-15N HSQC1 mM [U-99% 13C; U-99% 15N] recombinant cytotoxin-1, 95 v/v non-labeled H2O, 5 v/v 99.9%-2H D2O, 3 uM non-labeled NaOH, 1 uM non-labeled HCl95% H2O/5% D2O06.5101325 Pa303Bruker Avance 700
72D 1H-13C HSQC aliphatic1 mM [U-99% 13C; U-99% 15N] recombinant cytotoxin-1, 95 v/v non-labeled H2O, 5 v/v 99.9%-2H D2O, 3 uM non-labeled NaOH, 1 uM non-labeled HCl95% H2O/5% D2O06.5101325 Pa303Bruker Avance 700
83D 1H-15N NOESY1 mM [U-99% 13C; U-99% 15N] recombinant cytotoxin-1, 95 v/v non-labeled H2O, 5 v/v 99.9%-2H D2O, 3 uM non-labeled NaOH, 1 uM non-labeled HCl95% H2O/5% D2O06.5101325 Pa303Bruker Avance 700
93D 1H-13C NOESY aliphatic1 mM [U-99% 13C; U-99% 15N] recombinant cytotoxin-1, 95 v/v non-labeled H2O, 5 v/v 99.9%-2H D2O, 3 uM non-labeled NaOH, 1 uM non-labeled HCl95% H2O/5% D2O06.5101325 Pa303Bruker Avance 700
101D watergate1 mM [U-99% 13C; U-99% 15N] recombinant cytotoxin-1, 95 v/v non-labeled H2O, 5 v/v 99.9%-2H D2O, 3 uM non-labeled NaOH, 1 uM non-labeled HCl95% H2O/5% D2O06.5101325 Pa303Bruker Avance 600
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1BrukerAvance700
2BrukerAvance600
NMR Refinement
MethodDetailsSoftware
restrained Rosetta minimizationas in: J Am Chem Soc. 2014 Feb 5;136(5):1893-906. Protein NMR structures refined with Rosetta have higher accuracy relative to corresponding X-ray crystal structures. Mao B, Tejero R, Baker D, Montelione GT.Rosetta
NMR Ensemble Information
Conformer Selection Criteriatarget function
Conformers Calculated Total Number200
Conformers Submitted Total Number20
Representative Model17 (quality score)
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1collectionTopSpin2.0.aBruker Biospin
2chemical shift assignmentCARA1.8.4Keller and Wuthrich
5structure calculationCYANA1.0.6Guntert, Mumenthaler and Wuthrich
3chemical shift assignmentCARA1.8.4Keller and Wuthrich
4refinementRosetta3.3David Baker