5LGF | pdb_00005lgf

Solution structure of the N-terminal domain of Ogataea polymorpha telomerase reverse transcriptase


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
12D 1H-15N HSQC0.5 mM [U-99% 13C; U-99% 15N] N-terminal domain of Ogataea polymorpha telomerase reverse transcriptase, 20 mM sodium phosphate, 50 mM sodium chloride, 1 mM DTT, 0.02 % sodium azide90% H2O/10% D2O0.05 M7.01 atm303Bruker AVANCE 700
22D 1H-13C HSQC aliphatic0.5 mM [U-99% 13C; U-99% 15N] N-terminal domain of Ogataea polymorpha telomerase reverse transcriptase, 20 mM sodium phosphate, 50 mM sodium chloride, 1 mM DTT, 0.02 % sodium azide100% D2O0.05 M7.01 atm303Bruker AVANCE 700
32D 1H-13C HSQC aromatic0.5 mM [U-99% 13C; U-99% 15N] N-terminal domain of Ogataea polymorpha telomerase reverse transcriptase, 20 mM sodium phosphate, 50 mM sodium chloride, 1 mM DTT, 0.02 % sodium azide100% D2O0.05 M7.01 atm303Bruker AVANCE 700
43D HNCO0.5 mM [U-99% 13C; U-99% 15N] N-terminal domain of Ogataea polymorpha telomerase reverse transcriptase, 20 mM sodium phosphate, 50 mM sodium chloride, 1 mM DTT, 0.02 % sodium azide90% H2O/10% D2O0.05 M7.01 atm303Bruker AVANCE 700
53D HCACO0.5 mM [U-99% 13C; U-99% 15N] N-terminal domain of Ogataea polymorpha telomerase reverse transcriptase, 20 mM sodium phosphate, 50 mM sodium chloride, 1 mM DTT, 0.02 % sodium azide90% H2O/10% D2O0.05 M7.01 atm303Bruker AVANCE 700
63D HNCA0.5 mM [U-99% 13C; U-99% 15N] N-terminal domain of Ogataea polymorpha telomerase reverse transcriptase, 20 mM sodium phosphate, 50 mM sodium chloride, 1 mM DTT, 0.02 % sodium azide90% H2O/10% D2O0.05 M7.01 atm303Bruker AVANCE 700
73D HN(CO)CA0.5 mM [U-99% 13C; U-99% 15N] N-terminal domain of Ogataea polymorpha telomerase reverse transcriptase, 20 mM sodium phosphate, 50 mM sodium chloride, 1 mM DTT, 0.02 % sodium azide90% H2O/10% D2O0.05 M7.01 atm303Bruker AVANCE 700
83D HNCACB0.5 mM [U-99% 13C; U-99% 15N] N-terminal domain of Ogataea polymorpha telomerase reverse transcriptase, 20 mM sodium phosphate, 50 mM sodium chloride, 1 mM DTT, 0.02 % sodium azide90% H2O/10% D2O0.05 M7.01 atm303Bruker AVANCE 700
93D CBCA(CO)NH0.5 mM [U-99% 13C; U-99% 15N] N-terminal domain of Ogataea polymorpha telomerase reverse transcriptase, 20 mM sodium phosphate, 50 mM sodium chloride, 1 mM DTT, 0.02 % sodium azide90% H2O/10% D2O0.05 M7.01 atm303Bruker AVANCE 700
103D HBHA(CO)NH0.5 mM [U-99% 13C; U-99% 15N] N-terminal domain of Ogataea polymorpha telomerase reverse transcriptase, 20 mM sodium phosphate, 50 mM sodium chloride, 1 mM DTT, 0.02 % sodium azide90% H2O/10% D2O0.05 M7.01 atm303Bruker AVANCE 700
113D HBHANH0.5 mM [U-99% 13C; U-99% 15N] N-terminal domain of Ogataea polymorpha telomerase reverse transcriptase, 20 mM sodium phosphate, 50 mM sodium chloride, 1 mM DTT, 0.02 % sodium azide90% H2O/10% D2O0.05 M7.01 atm303Bruker AVANCE 700
123D HNHA0.8 mM [U-99% 15N] N-terminal domain of Ogataea polymorpha telomerase reverse transcriptase, 20 mM sodium phosphate, 50 mM sodium chloride, 1 mM DTT, 0.02 % sodium azide90% H2O/10% D2O0.05 M7.01 atm303Bruker AVANCE 700
133D HNHB0.8 mM [U-99% 15N] N-terminal domain of Ogataea polymorpha telomerase reverse transcriptase, 20 mM sodium phosphate, 50 mM sodium chloride, 1 mM DTT, 0.02 % sodium azide90% H2O/10% D2O0.05 M7.01 atm303Bruker AVANCE 700
143D 1H-15N TOCSY0.8 mM [U-99% 15N] N-terminal domain of Ogataea polymorpha telomerase reverse transcriptase, 20 mM sodium phosphate, 50 mM sodium chloride, 1 mM DTT, 0.02 % sodium azide90% H2O/10% D2O0.05 M7.01 atm303Bruker AVANCE 700
153D 1H-15N NOESY0.8 mM [U-99% 15N] N-terminal domain of Ogataea polymorpha telomerase reverse transcriptase, 20 mM sodium phosphate, 50 mM sodium chloride, 1 mM DTT, 0.02 % sodium azide90% H2O/10% D2O0.05 M7.01 atm303Bruker AVANCE 700
163D 1H-13C NOESY0.5 mM [U-99% 13C; U-99% 15N] N-terminal domain of Ogataea polymorpha telomerase reverse transcriptase, 20 mM sodium phosphate, 50 mM sodium chloride, 1 mM DTT, 0.02 % sodium azide100% D2O0.05 M7.01 atm303Bruker AVANCE 700
172D 1H-15N HSQC0.8 mM [U-99% 15N] N-terminal domain of Ogataea polymorpha telomerase reverse transcriptase, 20 mM sodium phosphate, 50 mM sodium chloride, 1 mM DTT, 0.02 % sodium azide90% H2O/10% D2O0.05 M7.01 atm303Bruker AVANCE 700
183D HCCH-TOCSY0.5 mM [U-99% 13C; U-99% 15N] N-terminal domain of Ogataea polymorpha telomerase reverse transcriptase, 20 mM sodium phosphate, 50 mM sodium chloride, 1 mM DTT, 0.02 % sodium azide100% D2O0.05 M7.01 atm303Bruker AVANCE 700
202D DQF-COSY1.0 mM N-terminal domain of Ogataea polymorpha telomerase reverse transcriptase, 20 mM sodium phosphate, 50 mM sodium chloride, 1 mM DTT, 0.02 % sodium azide100% D2O0.05 M7.01 atm303Bruker AVANCE 600
212D 1H-1H NOESY1.0 mM N-terminal domain of Ogataea polymorpha telomerase reverse transcriptase, 20 mM sodium phosphate, 50 mM sodium chloride, 1 mM DTT, 0.02 % sodium azide100% D2O0.05 M7.01 atm303Bruker AVANCE 600
221H-15N NOE0.8 mM [U-99% 15N] N-terminal domain of Ogataea polymorpha telomerase reverse transcriptase, 20 mM sodium phosphate, 50 mM sodium chloride, 1 mM DTT, 0.02 % sodium azide90% H2O/10% D2O0.05 M7.01 atm303Bruker AVANCE 700
2315N T10.8 mM [U-99% 15N] N-terminal domain of Ogataea polymorpha telomerase reverse transcriptase, 20 mM sodium phosphate, 50 mM sodium chloride, 1 mM DTT, 0.02 % sodium azide90% H2O/10% D2O0.05 M7.01 atm303Bruker AVANCE 700
2415N T20.8 mM [U-99% 15N] N-terminal domain of Ogataea polymorpha telomerase reverse transcriptase, 20 mM sodium phosphate, 50 mM sodium chloride, 1 mM DTT, 0.02 % sodium azide90% H2O/10% D2O0.05 M7.01 atm303Bruker AVANCE 700
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1BrukerAVANCE700
2BrukerAVANCE600
NMR Refinement
MethodDetailsSoftware
simulated annealingCNS
NMR Ensemble Information
Conformer Selection Criteriastructures with the least restraint violations
Conformers Calculated Total Number50
Conformers Submitted Total Number20
Representative Model1 (closest to the average)
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1collectionTopSpinBruker Biospin
2processingNMRPipeDelaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax
3data analysisSparkyGoddard
4data analysisAutoAssignZimmerman, Moseley, Kulikowski and Montelione
5data analysisTALOSCornilescu, Delaglio and Bax
6data analysisNMRestPolshakov
7structure calculationARIALinge, O'Donoghue and Nilges
8structure calculationCNSBrunger, Adams, Clore, Gros, Nilges and Read
9data analysisRelaxFitPolshakov
10data analysisInsight IIAccelrys Software Inc.
11data analysisPROCHECK / PROCHECK-NMRLaskowski and MacArthur