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Crystal Structures of MOMP from Campylobacter jejuni
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 4.25 295.15 0.05M sodium citrate, 35% (v/v) Peg 400, 0.07 M potassium chloride
Crystal Properties Matthews coefficient Solvent content 2.8 56.09
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 90.63 α = 90 b = 90.63 β = 90 c = 104.4 γ = 120
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 PIXEL DECTRIS PILATUS 6M-F 2014-06-27 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON ESRF BEAMLINE ID23-1 1.06733 ESRF ID23-1
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.1 39.24 99.5 0.06 29.89 13.5 28313
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2.1 2.175
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 2.1 39.24 26883 1429 99.51 0.19497 0.19345 0.2027 0.22241 0.2287 RANDOM 42.064
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.55 -0.27 -0.55 1.78
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 40.933 r_dihedral_angle_4_deg 14.652 r_dihedral_angle_3_deg 12.996 r_dihedral_angle_1_deg 6.306 r_long_range_B_refined 5.313 r_long_range_B_other 5.313 r_scangle_other 2.943 r_mcangle_it 2.13 r_mcangle_other 2.13 r_scbond_it 1.856
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 40.933 r_dihedral_angle_4_deg 14.652 r_dihedral_angle_3_deg 12.996 r_dihedral_angle_1_deg 6.306 r_long_range_B_refined 5.313 r_long_range_B_other 5.313 r_scangle_other 2.943 r_mcangle_it 2.13 r_mcangle_other 2.13 r_scbond_it 1.856 r_scbond_other 1.855 r_mcbond_it 1.401 r_mcbond_other 1.401 r_angle_refined_deg 1.397 r_angle_other_deg 0.697 r_chiral_restr 0.085 r_bond_refined_d 0.01 r_gen_planes_refined 0.005 r_bond_other_d 0.001 r_gen_planes_other 0.001 r_nbd_refined r_nbd_other r_nbtor_refined r_nbtor_other r_xyhbond_nbd_refined r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_refined r_symmetry_vdw_other r_symmetry_hbond_refined r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_scangle_it r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 3081 Nucleic Acid Atoms Solvent Atoms 127 Heterogen Atoms 49
Software Software Software Name Purpose REFMAC refinement xia2 data reduction SCALA data scaling PHASER phasing