5LBJ
Solution structure of the bacterial toxin LdrD in Tetrafluorethanol
SOLUTION NMR
| NMR Experiment | ||||||||
|---|---|---|---|---|---|---|---|---|
| Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
| 1 | 2D NOESY | 1 mM 1H LdrD | trifluoroethanol/water | 0 | 7 | 1 bar | 298 | Bruker AVANCE III 700 |
| 2 | 2D TOCSY | 1 mM 1H LdrD | trifluoroethanol/water | 0 | 7 | 1 bar | 298 | Bruker AVANCE III 700 |
| 3 | 2D 1H-13C HSQC | 1 mM 1H LdrD | trifluoroethanol/water | 0 | 7 | 1 bar | 298 | Bruker AVANCE III 700 |
| NMR Spectrometer Information | |||
|---|---|---|---|
| Spectrometer | Manufacturer | Model | Field Strength |
| 1 | Bruker | AVANCE III | 700 |
| NMR Refinement | ||
|---|---|---|
| Method | Details | Software |
| simulated annealing | CNS | |
| NMR Ensemble Information | |
|---|---|
| Conformer Selection Criteria | structures with the lowest energy |
| Conformers Calculated Total Number | 100 |
| Conformers Submitted Total Number | 20 |
| Representative Model | 1 (lowest energy) |
| Computation: NMR Software | ||||
|---|---|---|---|---|
| # | Classification | Version | Software Name | Author |
| 7 | refinement | CNS | 1.3 | Brunger, Adams, Clore, Gros, Nilges and Read |
| 2 | structure calculation | CYANA | Guntert, Mumenthaler and Wuthrich | |
| 4 | peak picking | Sparky | Goddard | |
| 6 | processing | NMRPipe | Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax | |
