5LAO

S-nitrosylated 3D NMR structure of the cytoplasmic rhodanese domain of the inner membrane protein YgaP from Escherichia coli


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
1NOESY1 mM [U-99% 13C; U-99% 15N] S-nitrosylated rhodanese domain95% H2O/5% D2O0 mM7AMBIENT Pa303.15Bruker AVANCE III 700
23D HCCH-TOCSY1 mM [U-99% 13C; U-99% 15N] S-nitrosylated rhodanese domain95% H2O/5% D2O0 mM7AMBIENT Pa303.15Bruker AVANCE III 700
33D 1H-15N TOCSY1 mM [U-99% 13C; U-99% 15N] S-nitrosylated rhodanese domain95% H2O/5% D2O0 mM7AMBIENT Pa303.15Bruker AVANCE III 700
43D HNCACB1 mM [U-99% 13C; U-99% 15N] S-nitrosylated rhodanese domain95% H2O/5% D2O0 mM7AMBIENT Pa303.15Bruker AVANCE III 700
53D HN(CO)CA1 mM [U-99% 13C; U-99% 15N] S-nitrosylated rhodanese domain95% H2O/5% D2O0 mM7AMBIENT Pa303.15Bruker AVANCE III 700
62D TROSY1 mM [U-99% 13C; U-99% 15N] S-nitrosylated rhodanese domain95% H2O/5% D2O0 mM7AMBIENT Pa303.15Bruker AVANCE III 700
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1BrukerAVANCE III700
NMR Refinement
MethodDetailsSoftware
energy minimizationOPAL
NMR Ensemble Information
Conformer Selection Criteriastructures with the least restraint violations
Conformers Calculated Total Number100
Conformers Submitted Total Number20
Representative Model1 (lowest energy)
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1refinementOPAL3.97Luginbuhl, Guntert, Billeter and Wuthrich
2structure calculationCYANA3.97Guntert, Mumenthaler and Wuthrich
3chemical shift assignmentXEASYBartels et al.