5LAM | pdb_00005lam

Refined 3D NMR structure of the cytoplasmic rhodanese domain of the inner membrane protein YgaP from Escherichia coli

SOLUTION NMR

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NMR Experiment
Experiment	Type	Sample Contents	Solvent	Ionic Strength	pH	Pressure	Temperature (K)	Spectrometer
1	NOESY	1 mM [U-99% 13C; U-99% 15N] Rhodanese domain	95% H2O/5% D2O	0 mM	7	AMBIENT Pa	303.15	Bruker AVANCE III 700
2	TROSY	1 mM [U-99% 13C; U-99% 15N] Rhodanese domain	95% H2O/5% D2O	0 mM	7	AMBIENT Pa	303.15	Bruker AVANCE III 700
3	3D 1H-15N TOCSY	1 mM [U-99% 13C; U-99% 15N] Rhodanese domain	95% H2O/5% D2O	0 mM	7	AMBIENT Pa	303.15	Bruker AVANCE III 700
4	3D HCCH-TOCSY	1 mM [U-99% 13C; U-99% 15N] Rhodanese domain	95% H2O/5% D2O	0 mM	7	AMBIENT Pa	303.15	Bruker AVANCE III 700
5	3D HNCACB	1 mM [U-99% 13C; U-99% 15N] Rhodanese domain	95% H2O/5% D2O	0 mM	7	AMBIENT Pa	303.15	Bruker AVANCE III 700
6	3D HN(CO)CA	1 mM [U-99% 13C; U-99% 15N] Rhodanese domain	95% H2O/5% D2O	0 mM	7	AMBIENT Pa	303.15	Bruker AVANCE III 700

NMR Spectrometer Information
Spectrometer	Manufacturer	Model	Field Strength
1	Bruker	AVANCE III	700

NMR Refinement
Method	Details	Software
Energy refinement		OPAL

NMR Ensemble Information
Conformer Selection Criteria	structures with the least restraint violations
Conformers Calculated Total Number	100
Conformers Submitted Total Number	20
Representative Model	1 (lowest energy)

Computation: NMR Software
#	Classification	Version	Software Name	Author
1	refinement	OPAL	3.97	Luginbuhl, Guntert, Billeter and Wuthrich
2	structure calculation	CYANA	3.97	Guntert, Mumenthaler and Wuthrich
3	chemical shift assignment	XEASY		Bartels et al.