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Solution Structure of Hge36: Scorpine-like Peptide from Hadrurus Gertschi
NMR Experiment Experiment Type Sample Contents Solvent Ionic Strength pH Pressure Temperature (K) Spectrometer 1 2D NOESY 3.0 mM HgeD 95% H2O/5% D2O 0 3.5 0.98 atm 298 Bruker AVANCE III 700 2 2D 1H-1H TOCSY 3.0 mM HgeD 95% H2O/5% D2O 0 3.5 0.98 atm 298 Varian INOVA 500 3 2D DQF-COSY 3.0 mM HgeD 95% H2O/5% D2O 0 3.5 0.98 atm 298 Varian INOVA 500 4 2D 1H-1H NOESY 3.0 mM HgeD 95% H2O/5% D2O 0 3.5 0.98 atm 298 Varian INOVA 500
NMR Spectrometer Information Spectrometer Manufacturer Model Field Strength 1 Bruker AVANCE III 700 2 Varian INOVA 500
NMR Refinement Method Details Software molecular dynamics chiral restrains added Amber
NMR Ensemble Information Conformer Selection Criteria structures with the lowest energy Conformers Calculated Total Number 400 Conformers Submitted Total Number 20 Representative Model 1 (lowest energy)
Computation: NMR Software # Classification Version Software Name Author 1 refinement Amber 9.0 Case, Darden, Cheatham III, Simmerling, Wang, Duke, Luo, ... and Kollman 2 structure calculation CYANA 2.1 Guntert, Mumenthaler and Wuthrich 3 chemical shift assignment CARA 1.8 Keller and Wuthrich 4 peak picking CARA 1.8 Keller and Wuthrich