X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSION, SITTING DROP296Crystals grew in the dark at room temperature from 0.5 + 0.5 uL sitting drops equilibrated over a reservoir containing 20-24% PEG3350 and 0.02M Na Citrate
Crystal Properties
Matthews coefficientSolvent content
2.3447.48

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 53.88α = 90
b = 66.527β = 90
c = 165.927γ = 90
Symmetry
Space GroupP 21 21 21

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray93CCDMARMOSAIC 225 mm CCD2015-08-22MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONAPS BEAMLINE 21-ID-F0.9786APS21-ID-F

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
11.9845.210021.67.242545

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodResolution (High)Resolution (Low)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONTHROUGHOUT1.9845.240336214199.530.194810.192060.246RANDOM46.949
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
0.31-2.942.64
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg36.205
r_dihedral_angle_4_deg25.388
r_dihedral_angle_3_deg15.969
r_long_range_B_other9.888
r_long_range_B_refined9.859
r_scangle_other7.071
r_dihedral_angle_1_deg6.332
r_mcangle_it5.827
r_mcangle_other5.826
r_scbond_it4.688
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg36.205
r_dihedral_angle_4_deg25.388
r_dihedral_angle_3_deg15.969
r_long_range_B_other9.888
r_long_range_B_refined9.859
r_scangle_other7.071
r_dihedral_angle_1_deg6.332
r_mcangle_it5.827
r_mcangle_other5.826
r_scbond_it4.688
r_scbond_other4.688
r_mcbond_it4.182
r_mcbond_other4.182
r_angle_refined_deg1.921
r_angle_other_deg1.168
r_chiral_restr0.116
r_bond_refined_d0.017
r_gen_planes_refined0.011
r_bond_other_d0.004
r_gen_planes_other0.002
r_nbd_refined
r_nbd_other
r_nbtor_refined
r_nbtor_other
r_xyhbond_nbd_refined
r_xyhbond_nbd_other
r_metal_ion_refined
r_metal_ion_other
r_symmetry_vdw_refined
r_symmetry_vdw_other
r_symmetry_hbond_refined
r_symmetry_hbond_other
r_symmetry_metal_ion_refined
r_symmetry_metal_ion_other
r_scangle_it
r_rigid_bond_restr
r_sphericity_free
r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms4088
Nucleic Acid Atoms
Solvent Atoms231
Heterogen Atoms47

Software

Software
Software NamePurpose
REFMACrefinement
HKL-2000data reduction
HKL-2000data scaling
MOLREPphasing