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Crystal structure of Eis from Mycobacterium tuberculosis in complex with sulfonamide inhibitor 39 and coenzyme A
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 8.5 295 Tris-HCl pH 8.5 adjusted at room temperature (100 mM), PEG 8,000 (10-15% w/v), and (NH4)2SO4 (0.4 M)
Crystal Properties Matthews coefficient Solvent content 3.84 68
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 174.8 α = 90 b = 174.8 β = 90 c = 121.985 γ = 120
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD RAYONIX MX300-HS 2014-06-10 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON APS BEAMLINE 22-ID 1.00 APS 22-ID
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.1 50 95.8 16 3.9 37907
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 2.1 40 37907 2002 95.77 0.19333 0.19198 0.1991 0.21924 0.2257 RANDOM 35.039
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -1.6 -0.8 -1.6 5.18
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 31.003 r_dihedral_angle_4_deg 18.234 r_dihedral_angle_3_deg 16.594 r_long_range_B_refined 6.053 r_long_range_B_other 5.904 r_dihedral_angle_1_deg 5.824 r_scangle_other 3.058 r_mcangle_it 2.597 r_mcangle_other 2.596 r_scbond_it 1.83
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 31.003 r_dihedral_angle_4_deg 18.234 r_dihedral_angle_3_deg 16.594 r_long_range_B_refined 6.053 r_long_range_B_other 5.904 r_dihedral_angle_1_deg 5.824 r_scangle_other 3.058 r_mcangle_it 2.597 r_mcangle_other 2.596 r_scbond_it 1.83 r_scbond_other 1.83 r_mcbond_other 1.496 r_mcbond_it 1.495 r_angle_refined_deg 1.336 r_angle_other_deg 0.754 r_chiral_restr 0.151 r_bond_refined_d 0.006 r_gen_planes_refined 0.004 r_bond_other_d 0.001 r_gen_planes_other 0.001 r_nbd_refined r_nbd_other r_nbtor_refined r_nbtor_other r_xyhbond_nbd_refined r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_refined r_symmetry_vdw_other r_symmetry_hbond_refined r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_scangle_it r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 3047 Nucleic Acid Atoms Solvent Atoms 237 Heterogen Atoms 50
Software Software Software Name Purpose REFMAC refinement HKL-2000 data reduction HKL-2000 data scaling PHASER phasing