5IAY

NMR structure of UHRF1 Tandem Tudor Domains in a complex with Spacer peptide


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
12D 1H-13C HSQC1.0 mM [U-13C; U-15N] TTD, 1.2 mM Spacer90% H2O/10% D2O7.4297.15Varian INOVA 600
22D 1H-15N HSQC1.0 mM [U-13C; U-15N] TTD, 1.2 mM Spacer90% H2O/10% D2O7.4297.15Varian INOVA 600
33D HNCA1.0 mM [U-13C; U-15N] TTD, 1.2 mM Spacer90% H2O/10% D2O7.4297.15Varian INOVA 600
43D HNCO1.0 mM [U-13C; U-15N] TTD, 1.2 mM Spacer90% H2O/10% D2O7.4297.15Varian INOVA 600
53D HNCACB1.0 mM [U-13C; U-15N] TTD, 1.2 mM Spacer90% H2O/10% D2O7.4297.15Varian INOVA 600
153D CBCA(CO)NH1.0 mM [U-13C; U-15N] TTD, 1.2 mM Spacer90% H2O/10% D2O7.4297.15Varian INOVA 600
143D HN(CO)CA1.0 mM [U-13C; U-15N] TTD, 1.2 mM Spacer90% H2O/10% D2O7.4297.15Varian INOVA 600
133D HCCH-TOCSY1.0 mM [U-13C; U-15N] TTD, 1.2 mM Spacer90% H2O/10% D2O7.4297.15Varian INOVA 600
12MQ-CCH-TOCSY1.0 mM [U-13C; U-15N] TTD, 1.2 mM Spacer90% H2O/10% D2O7.4297.15Varian INOVA 600
113D 1H-13C NOESY aliphatic1.0 mM [U-13C; U-15N] TTD, 1.2 mM Spacer90% H2O/10% D2O7.4297.15Varian INOVA 600
103D 1H-13C NOESY aromatic1.0 mM [U-13C; U-15N] TTD, 1.2 mM Spacer90% H2O/10% D2O7.4297.15Varian INOVA 600
93D 1H-15N NOESY1.0 mM [U-13C; U-15N] TTD, 1.2 mM Spacer90% H2O/10% D2O7.4297.15Varian INOVA 600
8HBCBCGCDHD1.0 mM [U-13C; U-15N] TTD, 1.2 mM Spacer90% H2O/10% D2O7.4297.15Varian INOVA 600
7HBCBCGCDCEHE1.0 mM [U-13C; U-15N] TTD, 1.2 mM Spacer90% H2O/10% D2O7.4297.15Varian INOVA 600
6w2 x-filter TOCSY1.0 mM [U-13C; U-15N] TTD, 1.2 mM Spacer90% H2O/10% D2O7.4297.15Varian INOVA 600
20w1,w2 x-filter NOESY1.0 mM [U-13C; U-15N] TTD, 1.2 mM Spacer90% H2O/10% D2O7.4297.15Varian INOVA 600
1913C-filer HSQC-NOESY1.0 mM [U-13C; U-15N] TTD, 1.2 mM Spacer90% H2O/10% D2O7.4297.15Varian INOVA 600
182D 1H-15N HSQC1.0 mM [U-15N] Spacer, TTD90% H2O/10% D2O7.4297.15Varian INOVA 600
173D 1H-15N NOESY1.0 mM [U-15N] Spacer, TTD90% H2O/10% D2O7.4297.15Varian INOVA 600
163D 1H-15N TOCSY1.0 mM [U-15N] Spacer, TTD90% H2O/10% D2O7.4297.15Varian INOVA 600
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1VarianINOVA600
NMR Refinement
MethodDetailsSoftware
simulated annealingX-PLOR NIH
NMR Ensemble Information
Conformer Selection Criteriastructures with the lowest energy
Conformers Calculated Total Number100
Conformers Submitted Total Number20
Representative Model1 (lowest energy)
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1chemical shift assignmentSparkyGoddard
2peak pickingSparkyGoddard
3refinementX-PLOR NIHSchwieters, Kuszewski, Tjandra and Clore
4processingNMRPipeDelaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax
5collectionVNMRVarian
6data analysisTALOSCornilescu, Delaglio and Bax