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Amphiphysin SH3 in complex with Chikungunya virus nsP3 peptide
NMR Experiment Experiment Type Sample Contents Solvent Ionic Strength pH Pressure Temperature (K) Spectrometer 1 2D 1H-15N HSQC 0.5 mM [U-13C; U-15N] amphiphysin 2 SH3, 0.5 mM [U-13C; U-15N] CHIKV nsP3 peptide 90% H2O/10% D2O 6.5 1 atm 298.15 Varian INOVA 800 2 3D HNCACB 0.5 mM [U-13C; U-15N] amphiphysin 2 SH3, 0.5 mM [U-13C; U-15N] CHIKV nsP3 peptide 90% H2O/10% D2O 6.5 1 atm 298.15 Varian INOVA 800 3 3D CBCA(CO)NH 0.5 mM [U-13C; U-15N] amphiphysin 2 SH3, 0.5 mM [U-13C; U-15N] CHIKV nsP3 peptide 90% H2O/10% D2O 6.5 1 atm 298.15 Varian INOVA 800 4 3D H(CCO)NH 0.5 mM [U-13C; U-15N] amphiphysin 2 SH3, 0.5 mM [U-13C; U-15N] CHIKV nsP3 peptide 90% H2O/10% D2O 6.5 1 atm 298.15 Varian INOVA 800 5 3D C(CCO)NH 0.5 mM [U-13C; U-15N] amphiphysin 2 SH3, 0.5 mM [U-13C; U-15N] CHIKV nsP3 peptide 90% H2O/10% D2O 6.5 1 atm 298.15 Varian INOVA 800 6 3D HCCH-COSY 0.5 mM [U-13C; U-15N] amphiphysin 2 SH3, 0.5 mM [U-13C; U-15N] CHIKV nsP3 peptide 90% H2O/10% D2O 6.5 1 atm 298.15 Varian INOVA 800 10 2D (HB)CB(CGCD)HD 0.5 mM [U-13C; U-15N] amphiphysin 2 SH3, 0.5 mM [U-13C; U-15N] CHIKV nsP3 peptide 90% H2O/10% D2O 6.5 1 atm 298.15 Varian INOVA 800 9 2D (HB)CB(CGCDCE)HE 0.5 mM [U-13C; U-15N] amphiphysin 2 SH3, 0.5 mM [U-13C; U-15N] CHIKV nsP3 peptide 90% H2O/10% D2O 6.5 1 atm 298.15 Varian INOVA 800 7 3D 1H-15N NOESY 0.5 mM [U-13C; U-15N] amphiphysin 2 SH3, 0.5 mM [U-13C; U-15N] CHIKV nsP3 peptide 90% H2O/10% D2O 6.5 1 atm 298.15 Varian INOVA 800 8 3D 1H-13C NOESY 0.5 mM [U-13C; U-15N] amphiphysin 2 SH3, 0.5 mM [U-13C; U-15N] CHIKV nsP3 peptide 90% H2O/10% D2O 6.5 1 atm 298.15 Varian INOVA 800
NMR Spectrometer Information Spectrometer Manufacturer Model Field Strength 1 Varian INOVA 800
NMR Ensemble Information Conformer Selection Criteria Conformers Calculated Total Number Conformers Submitted Total Number 20
Computation: NMR Software # Classification Version Software Name Author 1 peak picking Sparky Goddard 2 chemical shift assignment Sparky Goddard 3 structure calculation CYANA Guntert, Mumenthaler and Wuthrich 4 refinement Amber Case, Darden, Cheatham III, Simmerling, Wang, Duke, Luo, ... and Kollman 5 processing VNMR Varian