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Crystal Structure of AKR1C3 complexed with CAPE
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 289 PEG 8000, NaCl, MES
Crystal Properties Matthews coefficient Solvent content 2.08 40.73
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 48.757 α = 90 b = 82.156 β = 102.08 c = 76.074 γ = 90
Symmetry Space Group P 1 21 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD OXFORD ONYX CCD 2015-01-26 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SEALED TUBE OXFORD DIFFRACTION ENHANCE ULTRA 1.5418
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Sym I (Observed) Rrim I (All) Rpim I (All) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2 82.156 99.8 0.192 0.211 0.084 7.9 5.7 39654 39654
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) R-Sym I (Observed) Rpim I (All) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2 2.11 99.4 0.684 0.684 0.342 0.8 4.4 5737
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION THROUGHOUT 2 74.39 37602 2036 99.83 0.1845 0.1821 0.1923 0.2275 0.1864 RANDOM 19.084
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -1.03 0.25 1.21 -0.27
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 38.381 r_dihedral_angle_3_deg 12.598 r_dihedral_angle_4_deg 10.505 r_dihedral_angle_1_deg 5.984 r_mcangle_it 2.425 r_angle_refined_deg 1.668 r_mcbond_it 1.577 r_mcbond_other 1.577 r_angle_other_deg 1.114 r_chiral_restr 0.098
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 38.381 r_dihedral_angle_3_deg 12.598 r_dihedral_angle_4_deg 10.505 r_dihedral_angle_1_deg 5.984 r_mcangle_it 2.425 r_angle_refined_deg 1.668 r_mcbond_it 1.577 r_mcbond_other 1.577 r_angle_other_deg 1.114 r_chiral_restr 0.098 r_bond_refined_d 0.015 r_gen_planes_refined 0.009 r_bond_other_d 0.006 r_gen_planes_other 0.005
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 4960 Nucleic Acid Atoms Solvent Atoms 454 Heterogen Atoms 138
Software Software Software Name Purpose SCALA data scaling REFMAC refinement PDB_EXTRACT data extraction CrysalisPro data reduction MOLREP phasing