5GIT

BTB domain of KEAP1 in complex with XX3


X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1EVAPORATION2930.2 M lithium acetate, 16% PEG 3350
Crystal Properties
Matthews coefficientSolvent content
2.2545.45

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 42.45α = 90
b = 42.45β = 90
c = 265.15γ = 120
Symmetry
Space GroupP 65 2 2

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100CCDADSC QUANTUM 315r2016-06-19MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONSSRF BEAMLINE BL17U0.987SSRFBL17U

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
12.1936.7699.517.211.88098

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodResolution (High)Resolution (Low)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONTHROUGHOUT2.1936.76763843999.240.219690.216310.27809RANDOM58.168
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
-0.03-0.01-0.030.08
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg38.589
r_dihedral_angle_4_deg26.534
r_dihedral_angle_3_deg18.684
r_long_range_B_other11.047
r_long_range_B_refined11.046
r_scangle_other8.7
r_mcangle_other7.609
r_mcangle_it7.606
r_dihedral_angle_1_deg6.242
r_scbond_it5.758
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg38.589
r_dihedral_angle_4_deg26.534
r_dihedral_angle_3_deg18.684
r_long_range_B_other11.047
r_long_range_B_refined11.046
r_scangle_other8.7
r_mcangle_other7.609
r_mcangle_it7.606
r_dihedral_angle_1_deg6.242
r_scbond_it5.758
r_scbond_other5.754
r_mcbond_it5.086
r_mcbond_other5.046
r_angle_refined_deg1.782
r_angle_other_deg0.891
r_chiral_restr0.103
r_bond_refined_d0.015
r_gen_planes_refined0.009
r_bond_other_d0.001
r_gen_planes_other0.001
r_nbd_refined
r_nbd_other
r_nbtor_refined
r_nbtor_other
r_xyhbond_nbd_refined
r_xyhbond_nbd_other
r_metal_ion_refined
r_metal_ion_other
r_symmetry_vdw_refined
r_symmetry_vdw_other
r_symmetry_hbond_refined
r_symmetry_hbond_other
r_symmetry_metal_ion_refined
r_symmetry_metal_ion_other
r_scangle_it
r_rigid_bond_restr
r_sphericity_free
r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms1014
Nucleic Acid Atoms
Solvent Atoms32
Heterogen Atoms26

Software

Software
Software NamePurpose
REFMACrefinement
HKL-2000data reduction
SCALAdata scaling
MOLREPphasing