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KpFlo11 presents a novel member of the Flo11 family with a unique recognition pattern for homophilic interactions
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 4UYS PDB ENTRY 4UYS
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 4.6 0.2 M AMMONIUM ACETATE, 0.1 M SODIUM ACETATE PH 4.6, 15 % PEG 4000
Crystal Properties Matthews coefficient Solvent content 1.81 32.05
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 35.54 α = 90 b = 58.52 β = 90 c = 76.55 γ = 90
Symmetry Space Group P 21 21 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 PIXEL DECTRIS PILATUS 6M MIRRORS 2015-03-21 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON BESSY BEAMLINE 14.1 BESSY 14.1
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.4 30 95.9 0.06 20.95 6.7 42777 4.3
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.4 1.45 94.7 0.46 4.7 6.9
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Starting model Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT PDB ENTRY 4UYS 1.4 30 29332 1581 95.93 0.13596 0.13355 0.1495 0.17937 0.188 RANDOM 16.887
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 1.38 -1.12 -0.26
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 37.221 r_sphericity_free 37.008 r_dihedral_angle_4_deg 16.755 r_dihedral_angle_3_deg 13.216 r_sphericity_bonded 10.694 r_dihedral_angle_1_deg 7.756 r_scbond_it 2.259 r_mcangle_it 1.982 r_rigid_bond_restr 1.661 r_angle_refined_deg 1.659
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 37.221 r_sphericity_free 37.008 r_dihedral_angle_4_deg 16.755 r_dihedral_angle_3_deg 13.216 r_sphericity_bonded 10.694 r_dihedral_angle_1_deg 7.756 r_scbond_it 2.259 r_mcangle_it 1.982 r_rigid_bond_restr 1.661 r_angle_refined_deg 1.659 r_mcbond_it 1.602 r_mcbond_other 1.564 r_angle_other_deg 0.947 r_chiral_restr 0.094 r_bond_refined_d 0.012 r_gen_planes_refined 0.008 r_bond_other_d 0.002 r_gen_planes_other 0.002 r_nbd_refined r_nbd_other r_nbtor_refined r_nbtor_other r_xyhbond_nbd_refined r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_refined r_symmetry_vdw_other r_symmetry_hbond_refined r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_mcangle_other r_scbond_other r_scangle_it r_scangle_other r_long_range_B_refined r_long_range_B_other
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 1388 Nucleic Acid Atoms Solvent Atoms 221 Heterogen Atoms 12
Software Software Software Name Purpose REFMAC refinement MOSFLM data reduction XDS data scaling PHASER phasing