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A fully oxidized human thioredoxin
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, SITTING DROP 7 294.15 Ammonium citrate, Bis-Tris propane
Crystal Properties Matthews coefficient Solvent content 2.25 45.26
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 53.204 α = 90 b = 61.231 β = 90 c = 64.839 γ = 90
Symmetry Space Group I 2 2 2
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC QUANTUM 315 2007-10-18 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON PAL/PLS BEAMLINE 5C (4A) 1.0 PAL/PLS 5C (4A)
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.4 50 96.39 17.88 5.6 20475
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION THROUGHOUT 1.4 15 19412 1042 96.39 0.16012 0.15764 0.1791 0.20942 0.2083 RANDOM 19.15
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 1.37 -0.94 -0.43
RMS Deviations Key Refinement Restraint Deviation r_sphericity_free 33.89 r_dihedral_angle_2_deg 26.913 r_sphericity_bonded 11.96 r_dihedral_angle_3_deg 11.744 r_rigid_bond_restr 7.996 r_dihedral_angle_1_deg 5.887 r_long_range_B_refined 3.916 r_scbond_it 3.376 r_angle_refined_deg 2.248 r_mcangle_it 1.879
RMS Deviations Key Refinement Restraint Deviation r_sphericity_free 33.89 r_dihedral_angle_2_deg 26.913 r_sphericity_bonded 11.96 r_dihedral_angle_3_deg 11.744 r_rigid_bond_restr 7.996 r_dihedral_angle_1_deg 5.887 r_long_range_B_refined 3.916 r_scbond_it 3.376 r_angle_refined_deg 2.248 r_mcangle_it 1.879 r_mcbond_it 1.638 r_chiral_restr 0.159 r_bond_refined_d 0.027 r_gen_planes_refined 0.013 r_bond_other_d r_angle_other_deg r_dihedral_angle_4_deg r_gen_planes_other r_nbd_refined r_nbd_other r_nbtor_refined r_nbtor_other r_xyhbond_nbd_refined r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_refined r_symmetry_vdw_other r_symmetry_hbond_refined r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_mcbond_other r_mcangle_other r_scbond_other r_scangle_it r_scangle_other r_long_range_B_other
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 817 Nucleic Acid Atoms Solvent Atoms 112 Heterogen Atoms 16
Software Software Software Name Purpose REFMAC refinement HKL-2000 data reduction HKL-2000 data scaling MOLREP phasing