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Crystal structure of Rep-Ant complex from Salmonella-temperate phage
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 5.6 296 Sodium citrate, Sodium chloride
Crystal Properties Matthews coefficient Solvent content 2.8 56.11
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 86.612 α = 90 b = 86.612 β = 90 c = 337.031 γ = 120
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC QUANTUM 270 2014-06-20 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON PAL/PLS BEAMLINE 7A (6B, 6C1) 1.00001 PAL/PLS 7A (6B, 6C1)
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.49 50 99.3 27.4 3.8 96551
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION THROUGHOUT 2.49 36.61 92085 4743 98.18 0.20131 0.20087 0.21006 0.2265 RANDOM 64.732
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.03 -0.01 -0.03 0.09
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 36.763 r_dihedral_angle_3_deg 16.332 r_dihedral_angle_4_deg 16.138 r_long_range_B_refined 6.341 r_long_range_B_other 6.34 r_dihedral_angle_1_deg 6.166 r_mcangle_it 3.851 r_mcangle_other 3.851 r_scangle_other 3.642 r_mcbond_it 2.385
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 36.763 r_dihedral_angle_3_deg 16.332 r_dihedral_angle_4_deg 16.138 r_long_range_B_refined 6.341 r_long_range_B_other 6.34 r_dihedral_angle_1_deg 6.166 r_mcangle_it 3.851 r_mcangle_other 3.851 r_scangle_other 3.642 r_mcbond_it 2.385 r_mcbond_other 2.385 r_scbond_it 2.227 r_scbond_other 2.227 r_angle_refined_deg 0.98 r_angle_other_deg 0.769 r_chiral_restr 0.058 r_bond_refined_d 0.006 r_gen_planes_refined 0.004 r_bond_other_d 0.002 r_gen_planes_other 0.001 r_nbd_refined r_nbd_other r_nbtor_refined r_nbtor_other r_xyhbond_nbd_refined r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_refined r_symmetry_vdw_other r_symmetry_hbond_refined r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_scangle_it r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 13261 Nucleic Acid Atoms Solvent Atoms 64 Heterogen Atoms
Software Software Software Name Purpose REFMAC refinement HKL-2000 data processing HKL-2000 data scaling PHENIX phasing DENZO data reduction