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coniferyl alcohol bound monolignol 4-O-methyltransferase 9
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 7.2 293 MOMT9 was grown via a hanging-drop vapor diffusion method in 22% (w/v) PEG 4000, 0.3 M Mg(NO3)2 (pH 7.2), and 1 mM DTT with 1 mM SAH and 1 mM coniferyl alcohol
Crystal Properties Matthews coefficient Solvent content 2.18 43.62
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 68.29 α = 90 b = 67.48 β = 93.18 c = 74.07 γ = 90
Symmetry Space Group P 1 21 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 PIXEL DECTRIS PILATUS 6M 2013-03-08 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON NSLS BEAMLINE X25 1.1 NSLS X25
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.73 73.96 100 11.3 5.84 70249
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION THROUGHOUT 1.73 73.96 66671 3541 99.96 0.18284 0.18127 0.1896 0.21249 0.2178 RANDOM 28.449
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.9 -0.69 -0.44 -0.38
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 37.207 r_dihedral_angle_3_deg 15.469 r_dihedral_angle_4_deg 12.97 r_long_range_B_refined 7.313 r_long_range_B_other 7.3 r_dihedral_angle_1_deg 6.619 r_scangle_other 5.931 r_mcangle_it 4.168 r_mcangle_other 4.168 r_scbond_it 4.087
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 37.207 r_dihedral_angle_3_deg 15.469 r_dihedral_angle_4_deg 12.97 r_long_range_B_refined 7.313 r_long_range_B_other 7.3 r_dihedral_angle_1_deg 6.619 r_scangle_other 5.931 r_mcangle_it 4.168 r_mcangle_other 4.168 r_scbond_it 4.087 r_scbond_other 4.087 r_mcbond_it 3.083 r_mcbond_other 3.083 r_angle_refined_deg 2.25 r_angle_other_deg 1.16 r_chiral_restr 0.146 r_bond_refined_d 0.024 r_gen_planes_refined 0.012 r_bond_other_d 0.003 r_gen_planes_other 0.002 r_nbd_refined r_nbd_other r_nbtor_refined r_nbtor_other r_xyhbond_nbd_refined r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_refined r_symmetry_vdw_other r_symmetry_hbond_refined r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_scangle_it r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 5375 Nucleic Acid Atoms Solvent Atoms 273 Heterogen Atoms 65
Software Software Software Name Purpose REFMAC refinement iMOSFLM data reduction SCALA data scaling MOLREP phasing