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Crystalization of human zinc insulin at pH 5.5
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 5.5 298 2 mcL protein (6 mg/mL in 2 mM HCl) + 2 mcL well solution (0.1 M Na2HPO4 pH 5.5, 10 % m/v PEG 6,000)
Crystal Properties Matthews coefficient Solvent content 1.84 33.08
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 81.283 α = 90 b = 81.283 β = 90 c = 33.64 γ = 120
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD AGILENT TITAN CCD 2012-09-11 M MAD
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SEALED TUBE OXFORD DIFFRACTION ENHANCE ULTRA 1.5418
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Rpim I (All) CC (Half) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.5 14.56 98.5 0.042 0.034 0.997 10 1.8 13078
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Rpim I (All) CC (Half) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.5 1.53 94.6 0.608 0.608 0.488 0.9 1.2 681
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 1.7 14.56 8633 424 99.17 0.1697 0.1673 0.1779 0.2172 0.2218 RANDOM 16.717
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.03 -0.03 -0.03 0.09
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 37.731 r_dihedral_angle_4_deg 19.036 r_dihedral_angle_3_deg 15.21 r_dihedral_angle_1_deg 6.256 r_angle_refined_deg 1.841 r_angle_other_deg 0.888 r_chiral_restr 0.11 r_bond_refined_d 0.018 r_gen_planes_refined 0.01 r_bond_other_d 0.002
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 37.731 r_dihedral_angle_4_deg 19.036 r_dihedral_angle_3_deg 15.21 r_dihedral_angle_1_deg 6.256 r_angle_refined_deg 1.841 r_angle_other_deg 0.888 r_chiral_restr 0.11 r_bond_refined_d 0.018 r_gen_planes_refined 0.01 r_bond_other_d 0.002 r_gen_planes_other 0.001
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 808 Nucleic Acid Atoms Solvent Atoms 86 Heterogen Atoms 4
Software Software Software Name Purpose CrysalisPro data collection Aimless data scaling MOLREP phasing REFMAC refinement PDB_EXTRACT data extraction CrysalisPro data reduction