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Sequence IENKADKAD inserted between GCN4 adaptors - Structure A9
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 2WPQ PDB ENTRY 2WPQ
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 1.6 M TRI-SODIUM CITRATE PH 6.5
Crystal Properties Matthews coefficient Solvent content 2.8 56
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 65.18 α = 90 b = 34.59 β = 117.66 c = 67.51 γ = 90
Symmetry Space Group P 1 21 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD MARRESEARCH 2009-09-20 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON SLS BEAMLINE X06DA SLS X06DA
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.8 33.7 98.9 0.05 14.3 3.7 24951 -3
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.8 1.91 97.4 0.62 2.07 3.67
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Starting model Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT PDB ENTRY 2WPQ 1.8 32.58 23695 1252 99.09 0.20812 0.20558 0.2139 0.25635 0.2632 RANDOM 46.867
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.55 2.9 -0.59 -1.93
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 31.812 r_dihedral_angle_4_deg 15.999 r_dihedral_angle_3_deg 14.415 r_scbond_it 5.209 r_mcangle_it 3.892 r_dihedral_angle_1_deg 3.511 r_mcbond_it 2.963 r_mcbond_other 2.952 r_angle_refined_deg 0.877 r_angle_other_deg 0.67
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 31.812 r_dihedral_angle_4_deg 15.999 r_dihedral_angle_3_deg 14.415 r_scbond_it 5.209 r_mcangle_it 3.892 r_dihedral_angle_1_deg 3.511 r_mcbond_it 2.963 r_mcbond_other 2.952 r_angle_refined_deg 0.877 r_angle_other_deg 0.67 r_chiral_restr 0.043 r_bond_refined_d 0.005 r_gen_planes_refined 0.002 r_bond_other_d 0.001 r_gen_planes_other 0.001 r_nbd_refined r_nbd_other r_nbtor_refined r_nbtor_other r_xyhbond_nbd_refined r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_refined r_symmetry_vdw_other r_symmetry_hbond_refined r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_mcangle_other r_scbond_other r_scangle_it r_scangle_other r_long_range_B_refined r_long_range_B_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 1681 Nucleic Acid Atoms Solvent Atoms 197 Heterogen Atoms
Software Software Software Name Purpose REFMAC refinement XDS data reduction XDS data scaling MOLREP phasing