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Crystal structure of the FHA domain of ArnA from Sulfolobus acidocaldarius
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 2FF4 PDB ENTRY 2FF4
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 RESERVOIR BUFFER: 0.1 M HEPES PH 7.5; 1.5 M LI2SO4 PROTEIN BUFFER: 20 MM TRIS PH 8.0; 100 MM NACL 3.5 MG/ML PROTEIN IN PROTEIN BUFFER MIX RESERVOIR AND PROTEIN 1:1
Crystal Properties Matthews coefficient Solvent content 2.54 51.5
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 43.57 α = 90 b = 43.57 β = 90 c = 71.83 γ = 90
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD MARRESEARCH 2012-03-08 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON BESSY BEAMLINE 14.1 BESSY 14.1
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.75 30.81 99.6 0.03 21.95 4.18 13490 -3 24.82
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.75 1.84 99.6 0.52 1.45 4.24
Refinement Statistics Diffraction ID Structure Solution Method Starting model Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT PDB ENTRY 2FF4 1.75 30.809 13488 685 99.54 0.1686 0.1675 0.1713 0.1893 0.1941 25.77
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3]
RMS Deviations Key Refinement Restraint Deviation f_dihedral_angle_d 13.118 f_angle_d 1.002 f_chiral_restr 0.06 f_bond_d 0.005 f_plane_restr 0.005
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 939 Nucleic Acid Atoms Solvent Atoms 120 Heterogen Atoms 22
Software Software Software Name Purpose PHENIX refinement XDS data reduction XSCALE data scaling CCP4 phasing