X-RAY DIFFRACTION

Crystallization

Crystal Properties
Matthews coefficientSolvent content
2.5752.08

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 92.217α = 90
b = 92.217β = 90
c = 170.414γ = 120
Symmetry
Space GroupH 3

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100 MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONESRFESRF

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Merge I (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
122594.70.082.8273221

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodStarting modelResolution (High)Resolution (Low)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONOTHERTHROUGHOUTNONE224.6332791173394.570.214090.21240.24501RANDOM
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg38.294
r_dihedral_angle_4_deg20.086
r_dihedral_angle_3_deg19.619
r_long_range_B_refined9.697
r_long_range_B_other9.697
r_dihedral_angle_1_deg6.91
r_scangle_other6.635
r_mcangle_other6.051
r_mcangle_it6.049
r_scbond_it4.361
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg38.294
r_dihedral_angle_4_deg20.086
r_dihedral_angle_3_deg19.619
r_long_range_B_refined9.697
r_long_range_B_other9.697
r_dihedral_angle_1_deg6.91
r_scangle_other6.635
r_mcangle_other6.051
r_mcangle_it6.049
r_scbond_it4.361
r_scbond_other4.357
r_mcbond_it3.996
r_mcbond_other3.995
r_angle_refined_deg1.9
r_angle_other_deg0.895
r_chiral_restr0.111
r_bond_refined_d0.017
r_gen_planes_refined0.009
r_gen_planes_other0.005
r_bond_other_d0.001
r_nbd_refined
r_nbd_other
r_nbtor_refined
r_nbtor_other
r_xyhbond_nbd_refined
r_xyhbond_nbd_other
r_metal_ion_refined
r_metal_ion_other
r_symmetry_vdw_refined
r_symmetry_vdw_other
r_symmetry_hbond_refined
r_symmetry_hbond_other
r_symmetry_metal_ion_refined
r_symmetry_metal_ion_other
r_scangle_it
r_rigid_bond_restr
r_sphericity_free
r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms3628
Nucleic Acid Atoms
Solvent Atoms7
Heterogen Atoms67

Software

Software
Software NamePurpose
REFMACrefinement