4V94

Molecular architecture of the eukaryotic chaperonin TRiC/CCT derived by a combination of chemical crosslinking and mass-spectrometry, XL-MS


X-RAY DIFFRACTION

Crystallization

Crystal Properties
Matthews coefficientSolvent content
3.0860.07

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 159.1α = 85.23
b = 162.54β = 81.15
c = 268.1γ = 61.17
Symmetry
Space GroupP 1

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodResolution (High)Resolution (Low)Number Reflections (All)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONMANUALLY PLACEDTHROUGHOUT3.8302169142092651046391.560.25920.25680.3046RANDOM141.5706
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg39.326
r_dihedral_angle_3_deg20.267
r_dihedral_angle_4_deg16.48
r_dihedral_angle_1_deg5.223
r_angle_refined_deg1.068
r_scangle_it0.578
r_scbond_it0.311
r_mcangle_it0.229
r_mcbond_it0.119
r_chiral_restr0.066
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg39.326
r_dihedral_angle_3_deg20.267
r_dihedral_angle_4_deg16.48
r_dihedral_angle_1_deg5.223
r_angle_refined_deg1.068
r_scangle_it0.578
r_scbond_it0.311
r_mcangle_it0.229
r_mcbond_it0.119
r_chiral_restr0.066
r_bond_refined_d0.007
r_gen_planes_refined0.004
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms59528
Nucleic Acid Atoms
Solvent Atoms
Heterogen Atoms512

Software

Software
Software NamePurpose
REFMACrefinement
PDB_EXTRACTdata extraction