4UUD
Human dynamin 1 K44A superconstricted polymer stabilized with GTP
ELECTRON MICROSCOPY
| Sample |
|---|
| GTP STABILIZED HUMAN DYNAMIN 1 K44A SUPER CONSTRICTED POLYMER |
| Specimen Preparation | |
|---|---|
| Sample Aggregation State | FILAMENT |
| Vitrification Instrument | LEICA EM GP |
| Cryogen Name | ETHANE |
| Sample Vitrification Details | PLUNGE FROZEN IN LIQUID ETHANE |
| 3D Reconstruction | |
|---|---|
| Reconstruction Method | HELICAL |
| Number of Particles | 7525 |
| Reported Resolution (Å) | 12.5 |
| Resolution Method | |
| Other Details | THIS MODEL INCORPORATES COORDINATES FROM 3ZYC, , 3SNH, AND 1DYN, WHICH WERE DOCKED INTO A HELICAL CRYO-EM DENSITY. SUBMISSION BASED ON EXPERIMENTAL DA ... |
| Refinement Type | |
| Symmetry Type | HELICAL |
| Map-Model Fitting and Refinement | |||||
|---|---|---|---|---|---|
| Id | 1 (3ZYC, 3SNH, 1DYN) | ||||
| Refinement Space | REAL | ||||
| Refinement Protocol | FLEXIBLE FIT | ||||
| Refinement Target | |||||
| Overall B Value | |||||
| Fitting Procedure | |||||
| Details | METHOD--YUP ALGORITHM REFINEMENT PROTOCOL--X-RAY | ||||
| Data Acquisition | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Detector Type | KODAK SO-163 FILM | ||||||||
| Electron Dose (electrons/Å**2) | 10 | ||||||||
| Imaging Experiment | 1 |
|---|---|
| Date of Experiment | 2012-12-17 |
| Temperature (Kelvin) | |
| Microscope Model | FEI/PHILIPS CM300FEG/HE |
| Minimum Defocus (nm) | 500 |
| Maximum Defocus (nm) | 2500 |
| Minimum Tilt Angle (degrees) | |
| Maximum Tilt Angle (degrees) | |
| Nominal CS | |
| Imaging Mode | BRIGHT FIELD |
| Specimen Holder Model | |
| Nominal Magnification | 49000 |
| Calibrated Magnification | |
| Source | FIELD EMISSION GUN |
| Acceleration Voltage (kV) | 200 |
| Imaging Details |
| EM Software | ||
|---|---|---|
| Task | Software Package | Version |
| MODEL FITTING | Yup.scx | |
| RECONSTRUCTION | SPIDER | |
| Image Processing | ||||
|---|---|---|---|---|
| CTF Correction Type | CTF Correction Details | Number of Particles Selected | Particle Selection Details | |
| INDIVIDUAL IMAGES | ||||
