4USR

Structure of flavin-containing monooxygenase from Pseudomonas stutzeri NF13


X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1735 % (W/V) TACSIMATE AT PH 7.0
Crystal Properties
Matthews coefficientSolvent content
2.8457

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 63.56α = 90
b = 63.56β = 90
c = 189.82γ = 120
Symmetry
Space GroupP 32 2 1

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray1202014-03-12MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONDIAMOND BEAMLINE I24DiamondI24

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Merge I (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
11.8335.941000.1114.99.8418932
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)R Merge I (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
11.831.8599.90.623.89.9

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodStarting modelResolution (High)Resolution (Low)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONMOLECULAR REPLACEMENTTHROUGHOUTPDB ENTRY 4A9W1.8335.9438217202899.950.164380.162320.20433RANDOM19.953
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
0.440.220.44-1.42
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg31.5
r_dihedral_angle_4_deg18.357
r_dihedral_angle_3_deg15.159
r_dihedral_angle_1_deg6.776
r_mcangle_it2.915
r_scbond_it2.795
r_angle_refined_deg2.155
r_mcbond_it2.046
r_mcbond_other2.046
r_angle_other_deg1.095
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg31.5
r_dihedral_angle_4_deg18.357
r_dihedral_angle_3_deg15.159
r_dihedral_angle_1_deg6.776
r_mcangle_it2.915
r_scbond_it2.795
r_angle_refined_deg2.155
r_mcbond_it2.046
r_mcbond_other2.046
r_angle_other_deg1.095
r_chiral_restr0.186
r_bond_refined_d0.02
r_gen_planes_refined0.012
r_bond_other_d0.002
r_gen_planes_other0.001
r_nbd_refined
r_nbd_other
r_nbtor_refined
r_nbtor_other
r_xyhbond_nbd_refined
r_xyhbond_nbd_other
r_metal_ion_refined
r_metal_ion_other
r_symmetry_vdw_refined
r_symmetry_vdw_other
r_symmetry_hbond_refined
r_symmetry_hbond_other
r_symmetry_metal_ion_refined
r_symmetry_metal_ion_other
r_mcangle_other
r_scbond_other
r_scangle_it
r_scangle_other
r_long_range_B_refined
r_long_range_B_other
r_rigid_bond_restr
r_sphericity_free
r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms2737
Nucleic Acid Atoms
Solvent Atoms211
Heterogen Atoms59

Software

Software
Software NamePurpose
REFMACrefinement
xia2data reduction
SCALAdata scaling
MOLREPphasing