4U86

Human Pin1 with cysteine sulfonic acid 113


X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSION, HANGING DROP7.527750mM HEPES7.5 1% PEG400 1.2-1.5M Ammonium Sulfate
Crystal Properties
Matthews coefficientSolvent content
2.7154.62

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 69.073α = 90
b = 69.073β = 90
c = 79.727γ = 120
Symmetry
Space GroupP 31 2 1

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100CCDADSC QUANTUM 315r2010-02-13MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONALS BEAMLINE 5.0.21.0ALS5.0.2

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
11.65099.731.95.229744
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)R Merge I (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
11.61.6399.40.6091.93.7

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodResolution (High)Resolution (Low)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONTHROUGHOUT1.634.5528112149999.650.1980.196270.23073RANDOM26.896
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
0.470.230.47-1.52
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg31.69
r_dihedral_angle_4_deg18.614
r_dihedral_angle_3_deg15.249
r_long_range_B_other7.402
r_long_range_B_refined7.384
r_dihedral_angle_1_deg6.784
r_scangle_other6.178
r_scbond_it4.258
r_scbond_other4.257
r_mcangle_other3.431
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg31.69
r_dihedral_angle_4_deg18.614
r_dihedral_angle_3_deg15.249
r_long_range_B_other7.402
r_long_range_B_refined7.384
r_dihedral_angle_1_deg6.784
r_scangle_other6.178
r_scbond_it4.258
r_scbond_other4.257
r_mcangle_other3.431
r_mcangle_it3.43
r_mcbond_it2.658
r_mcbond_other2.641
r_angle_refined_deg2.433
r_angle_other_deg1.032
r_chiral_restr0.148
r_bond_refined_d0.025
r_gen_planes_refined0.011
r_bond_other_d0.002
r_gen_planes_other0.001
r_nbd_refined
r_nbd_other
r_nbtor_refined
r_nbtor_other
r_xyhbond_nbd_refined
r_xyhbond_nbd_other
r_metal_ion_refined
r_metal_ion_other
r_symmetry_vdw_refined
r_symmetry_vdw_other
r_symmetry_hbond_refined
r_symmetry_hbond_other
r_symmetry_metal_ion_refined
r_symmetry_metal_ion_other
r_scangle_it
r_rigid_bond_restr
r_sphericity_free
r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms1162
Nucleic Acid Atoms
Solvent Atoms98
Heterogen Atoms17

Software

Software
Software NamePurpose
REFMACrefinement