☰ Navigation Tabs
Crystal structure of SSO0001
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 5.6 295 25% PEG 3350, 0.1M NaCitrate, 0.2M NaCl, pH 5.6, VAPOR DIFFUSION, HANGING DROP, temperature 295K
Crystal Properties Matthews coefficient Solvent content 3.13 60.69
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 86.152 α = 90 b = 197.761 β = 100.88 c = 89.41 γ = 90
Symmetry Space Group P 1 21 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC QUANTUM 315r mirrors 2012-10-30 M SINGLE WAVELENGTH 2 1 x-ray 100 CCD ADSC QUANTUM 210 mirrors 2012-10-30 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON APS BEAMLINE 19-ID 0.9794 APS 19-ID 2 SYNCHROTRON APS BEAMLINE 19-BM 1.738 APS 19-BM
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.35 40 97.3 0.045 25.6 3.7 121708 118972 1.7 2 49
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2.35 2.39 94.5
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Cut-off Sigma (I) Cut-off Sigma (F) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION SAD THROUGHOUT 2.35 40 2 1.7 100633 95585 5038 82.33 0.22 0.20533 0.20128 0.2032 0.2487 0.249 RANDOM 27.708
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.37 0.3 -0.16
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 34.563 r_dihedral_angle_4_deg 19.791 r_dihedral_angle_3_deg 17.005 r_scangle_it 6.285 r_dihedral_angle_1_deg 6.112 r_scbond_it 3.951 r_mcangle_it 3.029 r_mcbond_other 2.586 r_rigid_bond_restr 2.276 r_angle_refined_deg 2.092
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 34.563 r_dihedral_angle_4_deg 19.791 r_dihedral_angle_3_deg 17.005 r_scangle_it 6.285 r_dihedral_angle_1_deg 6.112 r_scbond_it 3.951 r_mcangle_it 3.029 r_mcbond_other 2.586 r_rigid_bond_restr 2.276 r_angle_refined_deg 2.092 r_mcbond_it 1.718 r_angle_other_deg 1.315 r_chiral_restr 0.17 r_bond_refined_d 0.022 r_gen_planes_refined 0.007 r_bond_other_d 0.001 r_gen_planes_other 0.001 r_nbd_refined r_nbd_other r_nbtor_refined r_nbtor_other r_xyhbond_nbd_refined r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_refined r_symmetry_vdw_other r_symmetry_hbond_refined r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 16077 Nucleic Acid Atoms Solvent Atoms 292 Heterogen Atoms 90
Software Software Software Name Purpose SBC-Collect data collection Auto-Rickshaw phasing REFMAC refinement HKL-3000 data reduction HKL-3000 data scaling