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Crystal structure of a monomeric SCP2-thiolase like protein type 1 (STLP1) from Mycobacterium smegmatis
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 MICROBATCH 7.5 291 100mM HEPES pH 7.5, 20% PEG 4000, 10% isopropanol, Microbatch, temperature 291K
Crystal Properties Matthews coefficient Solvent content 2.54 51.55
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 96.308 α = 116.46 b = 102.004 β = 101.28 c = 102.423 γ = 97.44
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 IMAGE PLATE MAR scanner 345 mm plate 2010-11-26 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON ESRF BEAMLINE BM14 0.9789 ESRF BM14
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.7 50 0.09 4.1 83286
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2.6 2.64 0.3 2.3 2.8
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION SAD THROUGHOUT 2.71 47.95 83286 4398 96.9 0.23492 0.23354 0.2441 0.26107 0.2709 RANDOM 46.718
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.01 0.02 0.03 0.02 0.03 0.01
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 40.296 r_dihedral_angle_3_deg 20.239 r_dihedral_angle_4_deg 19.793 r_dihedral_angle_1_deg 7.559 r_scangle_it 3.458 r_scbond_it 1.986 r_angle_refined_deg 1.872 r_mcangle_it 1.48 r_mcbond_it 0.767 r_chiral_restr 0.146
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 40.296 r_dihedral_angle_3_deg 20.239 r_dihedral_angle_4_deg 19.793 r_dihedral_angle_1_deg 7.559 r_scangle_it 3.458 r_scbond_it 1.986 r_angle_refined_deg 1.872 r_mcangle_it 1.48 r_mcbond_it 0.767 r_chiral_restr 0.146 r_bond_refined_d 0.019 r_gen_planes_refined 0.007
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 20012 Nucleic Acid Atoms Solvent Atoms 160 Heterogen Atoms
Software Software Software Name Purpose MAR345dtb data collection SHELXD phasing REFMAC refinement DENZO data reduction SCALA data scaling