☰ Navigation Tabs
Crystal Structure of E. Coli Alkaline Phosphatase D101A/D153A in complex with inorganic phosphate
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 5 298 PEG 3350, Bis-Tris, ammonium sulfate, glycerol (cryo-protectant)
Crystal Properties Matthews coefficient Solvent content 2.85 56.78
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 161.42 α = 90 b = 161.42 β = 90 c = 140.051 γ = 120
Symmetry Space Group P 63 2 2
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 PIXEL DECTRIS PILATUS 6M 2014-07-07 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON SSRL BEAMLINE BL11-1 0.97945 SSRL BL11-1
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Rpim I (All) CC (Half) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.24 52.89 100 0.438 0.096 0.996 7.8 21.6 51846
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Rpim I (All) CC (Half) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2.24 2.31 100 3.135 0.719 0.582 1.4 19.7 4420
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 2.24 52.89 49268 2548 99.97 0.219 0.2169 0.222 0.2589 0.2615 RANDOM 37.56
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 1.55 0.78 1.55 -5.04
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 41.085 r_dihedral_angle_4_deg 14.521 r_dihedral_angle_3_deg 14.217 r_dihedral_angle_1_deg 5.785 r_mcangle_it 2.062 r_mcbond_it 1.219 r_mcbond_other 1.219 r_angle_refined_deg 1.104 r_angle_other_deg 0.725 r_chiral_restr 0.059
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 41.085 r_dihedral_angle_4_deg 14.521 r_dihedral_angle_3_deg 14.217 r_dihedral_angle_1_deg 5.785 r_mcangle_it 2.062 r_mcbond_it 1.219 r_mcbond_other 1.219 r_angle_refined_deg 1.104 r_angle_other_deg 0.725 r_chiral_restr 0.059 r_bond_refined_d 0.006 r_gen_planes_refined 0.004 r_bond_other_d 0.001 r_gen_planes_other 0.001
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 6492 Nucleic Acid Atoms Solvent Atoms 182 Heterogen Atoms 48
Software Software Software Name Purpose REFMAC refinement PHASER phasing Aimless data scaling iMOSFLM data reduction PDB_EXTRACT data extraction