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Crystal Structures of mPGES-1 Inhibitor Complexes
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, SITTING DROP 294.15 100mM Tris HCl pH 8.5 + 35% PEG 1K
Crystal Properties Matthews coefficient Solvent content 4.18 70.55
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 76.585 α = 90 b = 76.585 β = 90 c = 123.617 γ = 120
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 110 CCD RAYONIX MX225HE 2009-04-02 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON APS BEAMLINE 31-ID .91986 APS 31-ID
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.41 32 99.4 11.6 5.6 51297
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 1.41 30 48696 2601 99.38 0.16334 0.16274 0.1656 0.1746 0.176 RANDOM 22.699
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.07 0.03 0.07 -0.21
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 39.834 r_sphericity_free 24.721 r_dihedral_angle_4_deg 16.101 r_dihedral_angle_3_deg 12.432 r_sphericity_bonded 12.139 r_scbond_it 4.746 r_long_range_B_refined 4.205 r_dihedral_angle_1_deg 3.738 r_rigid_bond_restr 2.815 r_mcangle_it 2.394
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 39.834 r_sphericity_free 24.721 r_dihedral_angle_4_deg 16.101 r_dihedral_angle_3_deg 12.432 r_sphericity_bonded 12.139 r_scbond_it 4.746 r_long_range_B_refined 4.205 r_dihedral_angle_1_deg 3.738 r_rigid_bond_restr 2.815 r_mcangle_it 2.394 r_mcbond_it 2.122 r_angle_refined_deg 0.99 r_chiral_restr 0.059 r_bond_refined_d 0.005 r_gen_planes_refined 0.005 r_bond_other_d r_angle_other_deg r_gen_planes_other r_nbd_refined r_nbd_other r_nbtor_refined r_nbtor_other r_xyhbond_nbd_refined r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_refined r_symmetry_vdw_other r_symmetry_hbond_refined r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_mcbond_other r_mcangle_other r_scbond_other r_scangle_it r_scangle_other r_long_range_B_other
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 1174 Nucleic Acid Atoms Solvent Atoms 117 Heterogen Atoms 108
Software Software Software Name Purpose REFMAC refinement PDB_EXTRACT data extraction REFMAC phasing Coot model building MOSFLM data reduction