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The structure of a possible adhesin C-terminal domain from Caldicellulosiruptor kronotskyensis
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, SITTING DROP 3.4 294 PEG ion HT screen from Hampton Research (Aliso Viejo, CA) condition G12 containing 0.07 M Citric acid, 0.03 M BIS-TRIS propane, and 16% (w/v) Polyethylene glycol 3350
Crystal Properties Matthews coefficient Solvent content 2.34 47.35
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 61.507 α = 90 b = 75.29 β = 90 c = 77.446 γ = 90
Symmetry Space Group P 21 21 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD Bruker Platinum 135 2014-07-24 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 ROTATING ANODE BRUKER AXS MICROSTAR 1.5418
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.7 55 99.8 17.48 8.24 40244 14.323
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.7 1.8 98.8 2.36 5.69
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION SAD THROUGHOUT 1.7 53.98 38105 1968 99.53 0.1522 0.15 0.1616 0.1941 0.2065 RANDOM 20.199
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.02 -0.01 0.03
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 37.246 r_dihedral_angle_4_deg 18.655 r_dihedral_angle_3_deg 13.215 r_long_range_B_refined 7.081 r_dihedral_angle_1_deg 6.964 r_long_range_B_other 6.608 r_scangle_other 4.244 r_mcangle_other 2.883 r_mcangle_it 2.881 r_scbond_it 2.86
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 37.246 r_dihedral_angle_4_deg 18.655 r_dihedral_angle_3_deg 13.215 r_long_range_B_refined 7.081 r_dihedral_angle_1_deg 6.964 r_long_range_B_other 6.608 r_scangle_other 4.244 r_mcangle_other 2.883 r_mcangle_it 2.881 r_scbond_it 2.86 r_scbond_other 2.86 r_mcbond_it 1.989 r_mcbond_other 1.983 r_angle_refined_deg 1.969 r_angle_other_deg 0.928 r_chiral_restr 0.122 r_bond_refined_d 0.019 r_gen_planes_refined 0.011 r_bond_other_d 0.002 r_gen_planes_other 0.002 r_nbd_refined r_nbd_other r_nbtor_refined r_nbtor_other r_xyhbond_nbd_refined r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_refined r_symmetry_vdw_other r_symmetry_hbond_refined r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_scangle_it r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 2678 Nucleic Acid Atoms Solvent Atoms 549 Heterogen Atoms 1
Software Software Software Name Purpose PROTEUM PLUS data scaling Coot model building REFMAC refinement