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Cryo-EM Structure of the 60S Ribosomal Subunit in Complex with Arx1 and Rei1
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 3U5H experimental model PDB 3U5I
Sample 60S RIBOSOMAL SUBUNIT IN COMPLEX WITH ARX1 AND REI1
Specimen Preparation Sample Aggregation State PARTICLE Vitrification Instrument HOMEMADE PLUNGER Cryogen Name ETHANE Sample Vitrification Details PLUNGE FREEZING IN LIQUID ETHANE AFTER MANUAL BLOTTING USING A MANUAL PLUNGE FREEZING DEVICE
3D Reconstruction Reconstruction Method SINGLE PARTICLE Number of Particles 84113 Reported Resolution (Å) 8.1 Resolution Method Other Details SUBMISSION BASED ON EXPERIMENTAL DATA FROM EMDB EMD-2169. (DEPOSITION ID: 10977). Refinement Type Symmetry Type POINT Point Symmetry C1
Map-Model Fitting and Refinement Id 1 (3U5H, 3U5I) Refinement Space REAL Refinement Protocol RIGID BODY FIT Refinement Target Cross-correlation coefficient Overall B Value Fitting Procedure Details METHOD--RIGID BODY REFINEMENT PROTOCOL--RIGID BODY
Data Acquisition Detector Type GATAN ULTRASCAN 4000 (4k x 4k) Electron Dose (electrons/Å**2) 20
Imaging Experiment 1 Date of Experiment 2012-02-21 Temperature (Kelvin) 87 Microscope Model FEI TECNAI 20 Minimum Defocus (nm) 1500 Maximum Defocus (nm) 4500 Minimum Tilt Angle (degrees) Maximum Tilt Angle (degrees) Nominal CS 2.3 Imaging Mode BRIGHT FIELD Specimen Holder Model Nominal Magnification 83000 Calibrated Magnification Source FIELD EMISSION GUN Acceleration Voltage (kV) 200 Imaging Details
EM Software Task Software Package Version MODEL FITTING UCSF Chimera RECONSTRUCTION SPIDER
Image Processing CTF Correction Type CTF Correction Details Number of Particles Selected Particle Selection Details PER FRAME