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N-TERMINAL BROMODOMAIN OF HUMAN BRD2 WITH 1-((2R,4S)-2-methyl-4-(phenylamino)-6-(4-(piperidin-1-ylmethyl)phenyl)-3,4-dihydroquinolin-1(2H)-yl)ethanone
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 7 293 0.1M HEPES PH 7.0, 26% PEG3350, 0.2M (NH4)2SO4 20C
Crystal Properties Matthews coefficient Solvent content 2.02 38.96
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 114.722 α = 90 b = 55.761 β = 94.4 c = 67.896 γ = 90
Symmetry Space Group C 1 2 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD RIGAKU A200 2009-03-26 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 ROTATING ANODE RIGAKU FR-E+ SUPERBRIGHT
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.73 45.45 93.2 0.05 18.1 3.3 41770 2
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.73 1.82 60.7 0.36 2.4 2.2
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 1.73 40.96 39661 2107 93.23 0.17263 0.17099 0.1788 0.20253 0.2073 RANDOM 29.208
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 1.05 -0.94 -0.46 -0.74
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 37.235 r_dihedral_angle_4_deg 21.108 r_dihedral_angle_3_deg 11.113 r_dihedral_angle_1_deg 4.162 r_angle_refined_deg 0.982 r_angle_other_deg 0.804 r_chiral_restr 0.053 r_gen_planes_refined 0.012 r_bond_refined_d 0.006 r_bond_other_d 0.001
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 37.235 r_dihedral_angle_4_deg 21.108 r_dihedral_angle_3_deg 11.113 r_dihedral_angle_1_deg 4.162 r_angle_refined_deg 0.982 r_angle_other_deg 0.804 r_chiral_restr 0.053 r_gen_planes_refined 0.012 r_bond_refined_d 0.006 r_bond_other_d 0.001 r_gen_planes_other 0.001 r_nbd_refined r_nbd_other r_nbtor_refined r_nbtor_other r_xyhbond_nbd_refined r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_refined r_symmetry_vdw_other r_symmetry_hbond_refined r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_mcbond_it r_mcbond_other r_mcangle_it r_mcangle_other r_scbond_it r_scbond_other r_scangle_it r_scangle_other r_long_range_B_refined r_long_range_B_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 2677 Nucleic Acid Atoms Solvent Atoms 396 Heterogen Atoms 77
Software Software Software Name Purpose REFMAC refinement MOSFLM data reduction SCALA data scaling