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Crystal structure of human mono-glyceride lipase in complex with SAR127303
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 3JW8 PDB ENTRY 3JW8
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 6 277 MES BUFFER 50MM PH6.0, MPD 40%(V/V) AT 4C
Crystal Properties Matthews coefficient Solvent content 3.02 59
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 86.25 α = 90 b = 126.26 β = 90 c = 138.62 γ = 90
Symmetry Space Group I 2 2 2
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC QUANTUM 4 TOROIDAL MIRROR 2008-10-20 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON ESRF BEAMLINE ID14-2 ESRF ID14-2
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.36 73.32 95.2 0.01 17.7 4.6 20609 3 52.356
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2.36 2.5 97.1 0.45 2.6 4.7
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Starting model Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT PDB ENTRY 3JW8 2.36 73.32 29604 2986 94.14 0.215 0.2099 0.2118 0.2591 0.2632 RANDOM 46.06
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 7.53157145 3.22051862 -10.75209006
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 4404 Nucleic Acid Atoms Solvent Atoms 241 Heterogen Atoms 40
Software Software Software Name Purpose BUSTER-TNT refinement MOSFLM data reduction SCALA data scaling MOLREP phasing