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Structure of MELK in complex with inhibitors
Crystallization Crystal Properties Matthews coefficient Solvent content 3.1 60
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 103.359 α = 90 b = 103.359 β = 90 c = 65.255 γ = 120
Symmetry Space Group P 31 2 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC CCD 2010-06-16 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON ESRF BEAMLINE ID29 ESRF ID29
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.02 36.91 99.4 0.05 14 3.6 26757
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Starting model Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION OTHER THROUGHOUT NONE 2.02 52.73 25262 1306 99.3 0.20685 0.20539 0.2108 0.236 0.2422 RANDOM
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3]
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 37.107 r_dihedral_angle_4_deg 21.227 r_dihedral_angle_3_deg 17.667 r_long_range_B_refined 7.206 r_dihedral_angle_1_deg 5.647 r_scbond_it 3.932 r_scbond_other 3.931 r_angle_other_deg 3.573 r_mcbond_it 3.124 r_mcbond_other 3.108
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 37.107 r_dihedral_angle_4_deg 21.227 r_dihedral_angle_3_deg 17.667 r_long_range_B_refined 7.206 r_dihedral_angle_1_deg 5.647 r_scbond_it 3.932 r_scbond_other 3.931 r_angle_other_deg 3.573 r_mcbond_it 3.124 r_mcbond_other 3.108 r_angle_refined_deg 1.406 r_chiral_restr 0.087 r_bond_refined_d 0.01 r_gen_planes_other 0.001 r_bond_other_d r_gen_planes_refined r_nbd_refined r_nbd_other r_nbtor_refined r_nbtor_other r_xyhbond_nbd_refined r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_refined r_symmetry_vdw_other r_symmetry_hbond_refined r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_mcangle_it r_mcangle_other r_scangle_it r_scangle_other r_long_range_B_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 2565 Nucleic Acid Atoms Solvent Atoms 195 Heterogen Atoms 25
Software Software Software Name Purpose REFMAC refinement XDS data reduction SCALA data scaling