X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
17.4pH 7.4
Crystal Properties
Matthews coefficientSolvent content
2.753.7

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 111.21α = 64.09
b = 111.5β = 75.07
c = 118.48γ = 62.42
Symmetry
Space GroupP 1

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100CCDMARRESEARCHBE LENSES DIAMOND LAUE2015-02-06MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONAPS BEAMLINE 21-ID-FAPS21-ID-F

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Merge I (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
12.554.398.50.06143.91542452
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)R Merge I (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
12.52.5697.70.6224

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodStarting modelResolution (High)Resolution (Low)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONMOLECULAR REPLACEMENTTHROUGHOUTPDB ENTRY 4UHI2.554.27146458778698.480.192490.190130.2371RANDOM64.354
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
0.14-1.142.57-1.76-1.690.14
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg35.256
r_dihedral_angle_4_deg19.153
r_dihedral_angle_3_deg13.83
r_mcangle_it6.218
r_dihedral_angle_1_deg5.737
r_scbond_it4.944
r_mcbond_it4.418
r_mcbond_other4.418
r_angle_refined_deg0.873
r_angle_other_deg0.572
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg35.256
r_dihedral_angle_4_deg19.153
r_dihedral_angle_3_deg13.83
r_mcangle_it6.218
r_dihedral_angle_1_deg5.737
r_scbond_it4.944
r_mcbond_it4.418
r_mcbond_other4.418
r_angle_refined_deg0.873
r_angle_other_deg0.572
r_chiral_restr0.053
r_gen_planes_refined0.007
r_bond_refined_d0.005
r_bond_other_d0.005
r_gen_planes_other0.004
r_nbd_refined
r_nbd_other
r_nbtor_refined
r_nbtor_other
r_xyhbond_nbd_refined
r_xyhbond_nbd_other
r_metal_ion_refined
r_metal_ion_other
r_symmetry_vdw_refined
r_symmetry_vdw_other
r_symmetry_hbond_refined
r_symmetry_hbond_other
r_symmetry_metal_ion_refined
r_symmetry_metal_ion_other
r_mcangle_other
r_scbond_other
r_scangle_it
r_scangle_other
r_long_range_B_refined
r_long_range_B_other
r_rigid_bond_restr
r_sphericity_free
r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms28704
Nucleic Acid Atoms
Solvent Atoms928
Heterogen Atoms1000

Software

Software
Software NamePurpose
REFMACrefinement
HKL-2000data reduction
HKL-2000data scaling
PHASERphasing