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Human Protein Kinase C THETA IN COMPLEX WITH LIGAND COMPOUND 11a (6-[(1,3-Dimethyl-azetidin-3-yl)-methyl-amino]-4(R)-methyl-7-phenyl-2,10-dihydro-9-oxa-1,2,4a-triaza-phenanthren-3-one)
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 4.25 PEG 3350, MgCl2, sodium acetate and sodium malonate, pH 4.25, VAPOR DIFFUSION, HANGING DROP
Crystal Properties Matthews coefficient Solvent content 2.83 56.55
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 74.822 α = 90 b = 77.026 β = 90 c = 147.547 γ = 90
Symmetry Space Group P 21 21 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 PIXEL DECTRIS PILATUS 6M 2012-10-19 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON SLS BEAMLINE X06SA 1.00 SLS X06SA
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.61 73.77 99.1 0.047 3.7 26584
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2.61 2.86 99.3 0.444 3.8
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION THROUGHOUT 2.61 73.77 25436 912 99.11 0.22982 0.22817 0.27681 0.2515 RANDOM 71.678
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 8.66 -4.38 -4.28
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 33.011 r_dihedral_angle_4_deg 15.432 r_dihedral_angle_3_deg 13.406 r_dihedral_angle_1_deg 6.004 r_scangle_it 3.375 r_scbond_it 2.228 r_mcangle_it 1.476 r_angle_refined_deg 1.123 r_angle_other_deg 0.914 r_mcbond_it 0.822
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 33.011 r_dihedral_angle_4_deg 15.432 r_dihedral_angle_3_deg 13.406 r_dihedral_angle_1_deg 6.004 r_scangle_it 3.375 r_scbond_it 2.228 r_mcangle_it 1.476 r_angle_refined_deg 1.123 r_angle_other_deg 0.914 r_mcbond_it 0.822 r_nbtor_refined 0.161 r_nbd_refined 0.158 r_mcbond_other 0.157 r_nbd_other 0.129 r_xyhbond_nbd_refined 0.119 r_symmetry_vdw_other 0.094 r_symmetry_hbond_refined 0.082 r_nbtor_other 0.073 r_chiral_restr 0.068 r_symmetry_vdw_refined 0.041 r_metal_ion_refined 0.04 r_bond_refined_d 0.009 r_gen_planes_refined 0.003 r_bond_other_d 0.002 r_gen_planes_other 0.001 r_xyhbond_nbd_other r_metal_ion_other r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_mcangle_other r_scbond_other r_scangle_other r_long_range_B_refined r_long_range_B_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 5375 Nucleic Acid Atoms Solvent Atoms 24 Heterogen Atoms 69
Software Software Software Name Purpose REFMAC refinement XDS data reduction XSCALE data scaling