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LpoB C-terminal domain from Escherichia coli
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, SITTING DROP 5.5 298.15 0.1M Bis-Tris, 2M ammonium sulfate , pH 5.5, VAPOR DIFFUSION, SITTING DROP, temperature 298.15K
Crystal Properties Matthews coefficient Solvent content 2.67 53.86
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 96.93 α = 90 b = 96.93 β = 90 c = 96.93 γ = 90
Symmetry Space Group P 21 3
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD RAYONIX MX300HE 2012-06-01 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON CLSI BEAMLINE 08B1-1 1.00 CLSI 08B1-1
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.8 68.54 99.6 7758 7727
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2.8 2.95 99.3
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 2.8 68.54 7350 355 99.87 0.22828 0.22531 0.2279 0.28859 0.2855 RANDOM 61.961
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3]
RMS Deviations Key Refinement Restraint Deviation r_long_range_B_refined 10.165 r_long_range_B_other 10.163 r_scangle_other 6.598 r_mcangle_it 5.967 r_mcangle_other 5.965 r_scbond_it 3.958 r_scbond_other 3.956 r_mcbond_other 3.686 r_mcbond_it 3.685 r_angle_refined_deg 1.372
RMS Deviations Key Refinement Restraint Deviation r_long_range_B_refined 10.165 r_long_range_B_other 10.163 r_scangle_other 6.598 r_mcangle_it 5.967 r_mcangle_other 5.965 r_scbond_it 3.958 r_scbond_other 3.956 r_mcbond_other 3.686 r_mcbond_it 3.685 r_angle_refined_deg 1.372 r_angle_other_deg 1.065 r_chiral_restr 0.064 r_bond_refined_d 0.01 r_bond_other_d 0.006 r_gen_planes_refined 0.006 r_gen_planes_other 0.004
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 1970 Nucleic Acid Atoms Solvent Atoms 24 Heterogen Atoms
Software Software Software Name Purpose MxDC data collection PHASER phasing REFMAC refinement MOSFLM data reduction SCALA data scaling