X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSION, HANGING DROP291Na-acetate, PEG 3350
Crystal Properties
Matthews coefficientSolvent content
2.0640.25

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 50.6α = 90
b = 62.2β = 90
c = 67.57γ = 90
Symmetry
Space GroupP 21 21 21

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100CCDADSC QUANTUM 315r2013-04-24MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONESRF BEAMLINE ID14-40.97620ESRFID14-4

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Sym I (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
11.533.8199.950.0836.39.6348276.4

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodResolution (High)Resolution (Low)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONTHROUGHOUT1.545.7633076175199.950.138020.13620.17228RANDOM12.324
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
-0.21-0.750.96
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg37.495
r_dihedral_angle_4_deg15.855
r_dihedral_angle_3_deg13.556
r_dihedral_angle_1_deg6.809
r_long_range_B_refined6.381
r_long_range_B_other6.165
r_scangle_other3.66
r_scbond_it2.405
r_scbond_other2.404
r_angle_refined_deg2.362
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg37.495
r_dihedral_angle_4_deg15.855
r_dihedral_angle_3_deg13.556
r_dihedral_angle_1_deg6.809
r_long_range_B_refined6.381
r_long_range_B_other6.165
r_scangle_other3.66
r_scbond_it2.405
r_scbond_other2.404
r_angle_refined_deg2.362
r_mcangle_other2.086
r_mcangle_it2.072
r_mcbond_it1.378
r_mcbond_other1.321
r_angle_other_deg1.118
r_chiral_restr0.223
r_bond_refined_d0.024
r_gen_planes_refined0.012
r_bond_other_d0.002
r_gen_planes_other0.002
r_nbd_refined
r_nbd_other
r_nbtor_refined
r_nbtor_other
r_xyhbond_nbd_refined
r_xyhbond_nbd_other
r_metal_ion_refined
r_metal_ion_other
r_symmetry_vdw_refined
r_symmetry_vdw_other
r_symmetry_hbond_refined
r_symmetry_hbond_other
r_symmetry_metal_ion_refined
r_symmetry_metal_ion_other
r_scangle_it
r_rigid_bond_restr
r_sphericity_free
r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms1821
Nucleic Acid Atoms
Solvent Atoms283
Heterogen Atoms1

Software

Software
Software NamePurpose
REFMACrefinement