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Mechanism of transhydrogenase coupling proton translocation and hydride transfer
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 lipidic subic phase 8.5 298 350 mM NH4-formate, 100mM Na-thiocynate, and 18% (v/v) 1-4-butanediol, pH 8.5, lipidic subic phase, temperature 298.0K
Crystal Properties Matthews coefficient Solvent content 3.45 64.33
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 97.221 α = 90 b = 86.388 β = 93.99 c = 125.149 γ = 90
Symmetry Space Group P 1 21 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 PIXEL DECTRIS PILATUS 6M M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON SSRL BEAMLINE BL11-1 0.97920 SSRL BL11-1
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 3.079 46.3 98.5 36118
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 3.079 46.3 36118 1899 98.46 0.22249 0.21945 0.2332 0.27963 0.283 RANDOM 74.675
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 5.92 -0.32 -1.87 -3.96
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 36.667 r_dihedral_angle_3_deg 22.212 r_dihedral_angle_4_deg 19.798 r_long_range_B_refined 10.617 r_long_range_B_other 10.616 r_mcangle_it 7.475 r_mcangle_other 7.475 r_scangle_other 7.462 r_dihedral_angle_1_deg 6.301 r_scbond_it 4.798
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 36.667 r_dihedral_angle_3_deg 22.212 r_dihedral_angle_4_deg 19.798 r_long_range_B_refined 10.617 r_long_range_B_other 10.616 r_mcangle_it 7.475 r_mcangle_other 7.475 r_scangle_other 7.462 r_dihedral_angle_1_deg 6.301 r_scbond_it 4.798 r_scbond_other 4.798 r_mcbond_it 4.736 r_mcbond_other 4.729 r_angle_refined_deg 1.548 r_angle_other_deg 0.9 r_chiral_restr 0.084 r_bond_refined_d 0.011 r_gen_planes_refined 0.006 r_bond_other_d 0.001 r_gen_planes_other 0.001
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 10352 Nucleic Acid Atoms Solvent Atoms Heterogen Atoms
Software Software Software Name Purpose Blu-Ice data collection PHASER phasing REFMAC refinement XDS data reduction SCALA data scaling