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M76H variant of human ferrochelatase
Crystallization Crystal Properties Matthews coefficient Solvent content 2.75 55.34
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 88.138 α = 90 b = 93.418 β = 90 c = 110.219 γ = 90
Symmetry Space Group P 21 21 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray CCD MARMOSAIC 225 mm CCD M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON APS BEAMLINE 22-BM 1.0 APS 22-BM
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.6 71.26 86.8 28630 26185 2 2
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 2.6 71.26 28630 26185 1400 96.33 0.20772 0.20499 0.202 0.25916 0.2521 RANDOM 34.849
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -3.16 -1.74 4.9
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 38.061 r_dihedral_angle_3_deg 17.674 r_dihedral_angle_4_deg 15.242 r_dihedral_angle_1_deg 6.317 r_scangle_it 3.865 r_scbond_it 2.432 r_angle_refined_deg 1.87 r_mcangle_it 1.648 r_mcbond_it 0.862 r_chiral_restr 0.119
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 38.061 r_dihedral_angle_3_deg 17.674 r_dihedral_angle_4_deg 15.242 r_dihedral_angle_1_deg 6.317 r_scangle_it 3.865 r_scbond_it 2.432 r_angle_refined_deg 1.87 r_mcangle_it 1.648 r_mcbond_it 0.862 r_chiral_restr 0.119 r_bond_refined_d 0.017 r_gen_planes_refined 0.009 r_bond_other_d r_angle_other_deg r_gen_planes_other r_nbd_refined r_nbd_other r_nbtor_refined r_nbtor_other r_xyhbond_nbd_refined r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_refined r_symmetry_vdw_other r_symmetry_hbond_refined r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_mcbond_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 5786 Nucleic Acid Atoms Solvent Atoms 109 Heterogen Atoms 212
Software Software Software Name Purpose REFMAC refinement