4KLC

E343D/F110A Double mutant of human ferrochelatase


X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSION, SITTING DROP291sitting drop at 18 degrees centigrade. Precipitating solution consisted of 0.1 M Bis-Tris pH 6.8, 40 % penterythritol ethoxylate (15/4 EO/OH), VAPOR DIFFUSION, SITTING DROP, temperature 291K
Crystal Properties
Matthews coefficientSolvent content
3.4864.64

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 62.659α = 90
b = 133.404β = 90
c = 136.781γ = 90
Symmetry
Space GroupP 21 21 2

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-rayCCDMARMOSAIC 225 mm CCD2010-09-01MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONAPS BEAMLINE 22-BM1.0APS22-BM

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
12.4136.7892.4410133790422

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodResolution (High)Resolution (Low)Number Reflections (All)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (All)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONMOLECULAR REPLACEMENTTHROUGHOUT2.4136.7845687225597.780.260.257310.255050.29872RANDOM30.645
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
2.04-0.85-1.19
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg38.513
r_dihedral_angle_4_deg21.17
r_dihedral_angle_3_deg18.104
r_dihedral_angle_1_deg6.557
r_scangle_it4.11
r_scbond_it2.617
r_angle_refined_deg1.845
r_mcangle_it1.707
r_mcbond_it0.912
r_chiral_restr0.11
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg38.513
r_dihedral_angle_4_deg21.17
r_dihedral_angle_3_deg18.104
r_dihedral_angle_1_deg6.557
r_scangle_it4.11
r_scbond_it2.617
r_angle_refined_deg1.845
r_mcangle_it1.707
r_mcbond_it0.912
r_chiral_restr0.11
r_bond_refined_d0.02
r_gen_planes_refined0.009
r_bond_other_d
r_angle_other_deg
r_gen_planes_other
r_nbd_refined
r_nbd_other
r_nbtor_refined
r_nbtor_other
r_xyhbond_nbd_refined
r_xyhbond_nbd_other
r_metal_ion_refined
r_metal_ion_other
r_symmetry_vdw_refined
r_symmetry_vdw_other
r_symmetry_hbond_refined
r_symmetry_hbond_other
r_symmetry_metal_ion_refined
r_symmetry_metal_ion_other
r_mcbond_other
r_rigid_bond_restr
r_sphericity_free
r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms5768
Nucleic Acid Atoms
Solvent Atoms308
Heterogen Atoms100

Software

Software
Software NamePurpose
REFMACrefinement