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Crystal structure of Pseudomonas aeruginosa strain K solvent tolerant elastase
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 seeding-capillary counter diffusion 8.7 298 0.1M sodium citrate tribasic dihydrate pH5.6, 1.0M Ammonium phosphate monobasic, pH 8.7, seeding-capillary counter diffusion, temperature 298K
Crystal Properties Matthews coefficient Solvent content 1.97 37.56
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 38.99 α = 90 b = 90.173 β = 113.814 c = 40.6 γ = 90
Symmetry Space Group P 1 21 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD RAYONIX MX225HE 2012-06-21 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON SPRING-8 BEAMLINE BL44XU 0.9 SPring-8 BL44XU
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.39 50 99.9 0.074 33.358 7.5 385687 385687 -3
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.39 1.41 99.9 0.612 3.66 7.3
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 1.39 45.09 51334 51267 2603 99.78 0.16836 0.16711 0.175 0.19136 0.2008 RANDOM 14.12
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.46 -0.32 -0.13
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 32.112 r_dihedral_angle_4_deg 19.704 r_dihedral_angle_3_deg 12.987 r_dihedral_angle_1_deg 6.089 r_scangle_it 5.17 r_scbond_it 3.4 r_angle_refined_deg 2.643 r_mcangle_it 2.496 r_mcbond_it 1.595 r_chiral_restr 0.16
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 32.112 r_dihedral_angle_4_deg 19.704 r_dihedral_angle_3_deg 12.987 r_dihedral_angle_1_deg 6.089 r_scangle_it 5.17 r_scbond_it 3.4 r_angle_refined_deg 2.643 r_mcangle_it 2.496 r_mcbond_it 1.595 r_chiral_restr 0.16 r_bond_refined_d 0.031 r_gen_planes_refined 0.016 r_bond_other_d r_angle_other_deg r_gen_planes_other r_nbd_refined r_nbd_other r_nbtor_refined r_nbtor_other r_xyhbond_nbd_refined r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_refined r_symmetry_vdw_other r_symmetry_hbond_refined r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_mcbond_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 2315 Nucleic Acid Atoms Solvent Atoms 186 Heterogen Atoms 41
Software Software Software Name Purpose HKL-2000 data collection auto model building REFMAC refinement DENZO data reduction SCALEPACK data scaling auto phasing