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Crystal structure of Cytochrome C Peroxidase W191G-Gateless in complex with quinazoline-2,4-diamine
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, SITTING DROP 6 283 Apo crystal grown in 500mM MES, pH 6.0. Soaked into 50mM
quinazoline-2,4-diamine, 25% MPD pH 4.5 (15min), VAPOR DIFFUSION, SITTING DROP, temperature 283K
Crystal Properties Matthews coefficient Solvent content 3.11 60.4
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 50.855 α = 90 b = 74.966 β = 90 c = 107.304 γ = 90
Symmetry Space Group P 21 21 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 80 CCD ADSC QUANTUM 315r 2010-10-20 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON ALS BEAMLINE 8.3.1 ALS 8.3.1
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.41 61.43 78971
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 1.41 29.26 78971 3961 99.4 0.1472 0.1462 0.1569 0.1656 0.1751 RANDOM 21.9512
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.04 1.52 -1.47
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 33.79 r_dihedral_angle_4_deg 23.326 r_dihedral_angle_3_deg 12.909 r_dihedral_angle_1_deg 5.655 r_scangle_it 3.786 r_scbond_it 2.519 r_angle_refined_deg 1.84 r_mcangle_it 1.812 r_mcbond_it 1.056 r_angle_other_deg 0.984
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 33.79 r_dihedral_angle_4_deg 23.326 r_dihedral_angle_3_deg 12.909 r_dihedral_angle_1_deg 5.655 r_scangle_it 3.786 r_scbond_it 2.519 r_angle_refined_deg 1.84 r_mcangle_it 1.812 r_mcbond_it 1.056 r_angle_other_deg 0.984 r_mcbond_other 0.317 r_chiral_restr 0.111 r_bond_refined_d 0.021 r_gen_planes_refined 0.01 r_bond_other_d 0.001 r_gen_planes_other 0.001
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 2328 Nucleic Acid Atoms Solvent Atoms 407 Heterogen Atoms 65
Software Software Software Name Purpose REFMAC refinement PDB_EXTRACT data extraction ADSC data collection DENZO data reduction SCALEPACK data scaling