☰ Navigation Tabs
Crystal structure of Cytochrome C Peroxidase W191G-Gateless in complex with Phenol
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, SITTING DROP 6 283 Apo crystal grown in 500mM MES, pH 6.0. Soaked into 100mM Phenol, 25% MPD (2h), VAPOR DIFFUSION, SITTING DROP, temperature 283K
Crystal Properties Matthews coefficient Solvent content 3.07 59.99
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 51.05 α = 90 b = 74.41 β = 90 c = 106.6 γ = 90
Symmetry Space Group P 21 21 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 80 CCD ADSC QUANTUM 315r 2012-10-27 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON ALS BEAMLINE 8.3.1 1.11587 ALS 8.3.1
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.19 40 123953
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 1.19 32.06 123952 6229 99.63 0.1267 0.1254 0.1286 0.1514 0.1534 RANDOM 15.0283
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.02 0.69 -0.67
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 33.463 r_dihedral_angle_4_deg 26.213 r_dihedral_angle_3_deg 12.13 r_dihedral_angle_1_deg 5.609 r_scangle_it 5.405 r_scbond_it 3.965 r_mcangle_it 2.831 r_rigid_bond_restr 2.143 r_mcbond_it 1.978 r_angle_refined_deg 1.799
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 33.463 r_dihedral_angle_4_deg 26.213 r_dihedral_angle_3_deg 12.13 r_dihedral_angle_1_deg 5.609 r_scangle_it 5.405 r_scbond_it 3.965 r_mcangle_it 2.831 r_rigid_bond_restr 2.143 r_mcbond_it 1.978 r_angle_refined_deg 1.799 r_chiral_restr 0.116 r_bond_refined_d 0.019 r_gen_planes_refined 0.012
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 2328 Nucleic Acid Atoms Solvent Atoms 495 Heterogen Atoms 57
Software Software Software Name Purpose REFMAC refinement PDB_EXTRACT data extraction ADSC data collection DENZO data reduction SCALEPACK data scaling