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Crystal structure of cpd 16 bound to Keap1 Kelch domain
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION 7 298 3.5M Na Formate, pH 7.0, VAPOR DIFFUSION, temperature 298K
Crystal Properties Matthews coefficient Solvent content 3.39 63.77
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 125.856 α = 90 b = 75.638 β = 106.09 c = 48.341 γ = 90
Symmetry Space Group C 1 2 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD RAYONIX MX225HE MONOCHROMATOR 2010-10-12 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON APS BEAMLINE 31-ID 1.0 APS 31-ID
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.97 19.913 99.8 0.141 0.141 6.1 3.8 30805
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) R-Sym I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.97 2.08 100 0.841 0.841 0.7 3.8 4472
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 1.97 19.42 30772 1549 99.62 0.1546 0.1533 0.1572 0.1787 0.1802 RANDOM 28.3695
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.02 -0.01 0.01 0.02
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 32.106 r_dihedral_angle_4_deg 17.775 r_dihedral_angle_3_deg 13.552 r_dihedral_angle_1_deg 7.326 r_mcangle_it 2.964 r_mcbond_other 2.044 r_mcbond_it 2.043 r_angle_refined_deg 1.77 r_angle_other_deg 0.962 r_chiral_restr 0.113
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 32.106 r_dihedral_angle_4_deg 17.775 r_dihedral_angle_3_deg 13.552 r_dihedral_angle_1_deg 7.326 r_mcangle_it 2.964 r_mcbond_other 2.044 r_mcbond_it 2.043 r_angle_refined_deg 1.77 r_angle_other_deg 0.962 r_chiral_restr 0.113 r_bond_refined_d 0.016 r_gen_planes_refined 0.009 r_gen_planes_other 0.006 r_bond_other_d 0.001
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 2185 Nucleic Acid Atoms Solvent Atoms 122 Heterogen Atoms 34
Software Software Software Name Purpose SCALA data scaling REFMAC refinement PDB_EXTRACT data extraction