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Crystal Structure of hBRAP1 N-BAR domain
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 5.3 293 10% MPD, 7% PEG 4000, 0.1M sodium citrate, pH 5.3, VAPOR DIFFUSION, HANGING DROP, temperature 293.0K
Crystal Properties Matthews coefficient Solvent content 2.5 50.84
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 79.147 α = 90 b = 81.278 β = 90 c = 81.101 γ = 90
Symmetry Space Group P 21 21 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC QUANTUM 4 2006-10-07 M SINGLE WAVELENGTH 2 1 x-ray 100 CCD ADSC QUANTUM 4 2006-10-07 M MAD 3 1 x-ray 100 CCD ADSC QUANTUM 4 2006-10-07 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON ESRF BEAMLINE ID29 0.9791 ESRF ID29 2 SYNCHROTRON ESRF BEAMLINE ID29 0.9791, 0.9792, 0.9756 ESRF ID29 3 SYNCHROTRON ESRF BEAMLINE ID29 0.9791 ESRF ID29
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1,2 2.53 57.41 94.9 0.083 13.9 4.6 15899 15899 59.298
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1,2 2.53 2.73 96.5 0.386 2.9 4.6 2323
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MAD THROUGHOUT 2.53 57.41 14986 14986 860 87.61 0.19891 0.19891 0.19587 0.195 0.2522 0.251 RANDOM 59.786
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 8.91 -5.93 -2.98
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 42.621 r_dihedral_angle_3_deg 21.409 r_dihedral_angle_4_deg 21.222 r_dihedral_angle_1_deg 6.556 r_angle_refined_deg 1.741 r_chiral_restr 0.114 r_bond_refined_d 0.014 r_gen_planes_refined 0.006
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 3331 Nucleic Acid Atoms Solvent Atoms 62 Heterogen Atoms
Software Software Software Name Purpose DNA data collection SHARP phasing REFMAC refinement MOSFLM data reduction SCALA data scaling