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Atomic structure of DUSP26
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION 6.5 298 0.15M Calcium Acetate, 0.1M Na Cacodylate pH 6.5, 17% PEG 8,000, VAPOR DIFFUSION, temperature 298K
Crystal Properties Matthews coefficient Solvent content 2.09 41.05
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 81.972 α = 90 b = 82.26 β = 90 c = 91.678 γ = 90
Symmetry Space Group P 21 21 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC QUANTUM 270 2012-06-20 M SINGLE WAVELENGTH 2 1 x-ray CCD ADSC QUANTUM 315r 2012-07-31
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON NSLS BEAMLINE X6A 0.97 NSLS X6A 2 SYNCHROTRON NSLS BEAMLINE X26C 1.075 NSLS X26C
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.68 15 98 55848 55848 1 1
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.8 1.86 88.8
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 1.68 10 3450 96.18 0.18659 0.18505 0.1974 0.21569 0.2252 RANDOM 37.144
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 2.68 -0.68 -2
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 32.61 r_sphericity_free 26.108 r_sphericity_bonded 23.528 r_dihedral_angle_4_deg 22.435 r_dihedral_angle_3_deg 15.041 r_rigid_bond_restr 9.392 r_dihedral_angle_1_deg 4.647 r_angle_refined_deg 0.897 r_angle_other_deg 0.58 r_chiral_restr 0.052
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 32.61 r_sphericity_free 26.108 r_sphericity_bonded 23.528 r_dihedral_angle_4_deg 22.435 r_dihedral_angle_3_deg 15.041 r_rigid_bond_restr 9.392 r_dihedral_angle_1_deg 4.647 r_angle_refined_deg 0.897 r_angle_other_deg 0.58 r_chiral_restr 0.052 r_bond_refined_d 0.004 r_gen_planes_refined 0.003 r_bond_other_d 0.001 r_gen_planes_other 0.001 r_nbd_refined r_nbd_other r_nbtor_refined r_nbtor_other r_xyhbond_nbd_refined r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_refined r_symmetry_vdw_other r_symmetry_hbond_refined r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_mcbond_it r_mcbond_other r_mcangle_it r_scbond_it r_scangle_it
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 4864 Nucleic Acid Atoms Solvent Atoms 491 Heterogen Atoms
Software Software Software Name Purpose REFMAC refinement PHASER phasing PHENIX refinement HKL-2000 data reduction HKL-2000 data scaling ADSC data collection